| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 86,060 | A→G | 5.8% | W220R (TGG→CGG) | PP_0075 ← | choline sulfate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 86,060 | 0 | A | G | 5.8% | 206.2 / 2.2 | 69 | W220R (TGG→CGG) | PP_0075 | choline sulfate transporter |
| Reads supporting (aligned to +/- strand): ref base A (34/30); new base G (2/2); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
CCCAGCATGCCTACCGCAACGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGC > NC_002947/85918‑86208 | cccAGCATGCCTACCGCAACGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAgccaggccag > 2:270783/1‑149 (MQ=255) aGCATGCCTACCCCACCGGCGCCGGGCACCACACGCAACATCACCTCCCTGTCCAGCAAAGGCACCGGGCTGAAAGGCGGGAGCTGCCCGGTGAACGCTGCCACCCCCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCaa < 8:241536/149‑1 (MQ=255) aTGCCTACCGCAACGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACTCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCt < 1:72327/149‑1 (MQ=255) cTACCGCAACGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGAc > 6:137566/1‑148 (MQ=255) aaCGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCa < 7:86599/149‑1 (MQ=255) aCGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAg > 7:280479/1‑149 (MQ=255) cGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAg‑g > 5:134822/1‑149 (MQ=255) ggCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑Gc < 7:279456/149‑1 (MQ=255) cgcTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCtt < 6:134822/149‑1 (MQ=255) gcagcaGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGAcc > 8:36028/1‑131 (MQ=255) gcagcaGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGAcc < 7:36028/131‑1 (MQ=255) gcagcaGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCaa > 1:114285/1‑148 (MQ=255) cagcagACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAGCCCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAAc < 1:75944/149‑1 (MQ=255) cagcagACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACa < 8:280479/149‑1 (MQ=255) agcagACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGAc > 4:178235/1‑128 (MQ=255) agcagACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGAc < 3:178235/128‑1 (MQ=255) agACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCt > 8:23258/1‑149 (MQ=255) agACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCt > 5:63552/1‑149 (MQ=255) aaCATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCACGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCgga > 8:132582/1‑146 (MQ=255) aCATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAg > 4:271062/1‑149 (MQ=255) cATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGc < 2:114285/149‑1 (MQ=255) tGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGt > 7:4988/1‑149 (MQ=255) gCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGa > 7:285580/1‑117 (MQ=255) gCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGa < 8:285580/117‑1 (MQ=255) gCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAAc < 2:186089/131‑1 (MQ=255) gCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAAc > 1:186089/1‑131 (MQ=255) tCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGgcg > 6:72446/1‑149 (MQ=255) ccATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGgtgc > 6:89242/1‑149 (MQ=255) cATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCgg < 6:67259/135‑1 (MQ=255) cATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCgg > 5:67259/1‑135 (MQ=255) tCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGCCCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCagag > 5:249891/1‑149 (MQ=255) cAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGTGCCAGAGt < 5:89242/148‑1 (MQ=255) cAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGt < 8:4988/148‑1 (MQ=255) gCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTg < 7:261846/149‑1 (MQ=255) cAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTg > 7:193054/1‑148 (MQ=255) aaGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAg < 5:137566/149‑1 (MQ=255) aGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCg > 2:82444/1‑148 (MQ=255) gCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGa < 4:31732/149‑1 (MQ=255) cTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGACGCACCGAt > 7:299585/1‑149 (MQ=255) aaaGGCGGGAGTTGCCCGGGGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCac < 8:252257/149‑1 (MQ=255) ggAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTg < 1:82444/149‑1 (MQ=255) cccGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGc > 6:152958/1‑149 (MQ=255) ccGGTTAAGGCTGCCACCCGCGGTACTTGGCAAACGACG‑CCCGGCAGCAGCCCGGCCTCCACGCTGACCTGCATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCATAGTTTGATGGCCGCACCGATCACGCCGGTGGCCAGGcc < 8:193054/149‑1 (MQ=255) cGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGccc > 2:114590/1‑149 (MQ=255) gTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCcag > 3:180324/1‑149 (MQ=255) gCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCagcagc > 2:170139/1‑147 (MQ=255) gCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaa < 1:170139/149‑1 (MQ=255) cTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaag < 6:63552/149‑1 (MQ=255) tGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaag > 4:41075/1‑148 (MQ=255) ccACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaaggaa < 5:72446/149‑1 (MQ=255) ccACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaagg < 7:23258/147‑1 (MQ=255) cACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaaggaag < 1:270783/149‑1 (MQ=255) cgcgGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGTCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAaggtag < 6:279607/149‑1 (MQ=255) cgcgGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAaggtag > 3:45028/1‑149 (MQ=255) cATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGAc < 3:271062/148‑1 (MQ=255) gCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGc > 3:287184/1‑149 (MQ=255) ccAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGcc < 2:317001/149‑1 (MQ=255) caaaaGAAG‑CCCGGCAGCAGCCATGCCAGCAAGCTCAACAGGATCAG‑CCTTATCAACAGCCTCAGCCAGCGTGGGCGCCAGAGTTTGAACGCCGAACCCCTCACGCAGGTCGCCAGGCCCAGCAGCAAGCAACGTAGGACCACCTCGc > 7:126750/3‑148 (MQ=255) cAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAGTGCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGcc > 1:70854/1‑149 (MQ=255) cAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGCCGGTTGCCAGGCCCAGCAGCAAGGAagggaggt > 4:30386/1‑138 (MQ=255) cAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaag > 6:55038/1‑128 (MQ=255) cAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaag < 5:55038/128‑1 (MQ=255) cAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAaggtaggt < 3:30386/138‑1 (MQ=255) ttgctgg‑CCTGGCTGCTGCCGGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaaggaag > 5:85673/7‑131 (MQ=255) ttgctgg‑CCTGGCTGCTGCCGGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCaaggaag < 6:85673/125‑1 (MQ=255) aaaGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTg > 3:89283/1‑149 (MQ=255) tgg‑CCTGGCTGCTGCCGGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAaggt > 5:248755/3‑129 (MQ=255) tgg‑CCTGGCTGCTGCCGGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAaggt < 6:248755/127‑1 (MQ=255) cccGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGtggct > 3:7300/1‑149 (MQ=255) cagcCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGCCCAGCGTGGGCGCCAGACTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGACCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTCGCTGGCCAGGt > 8:30842/1‑149 (MQ=255) gccaggccagCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTcc < 4:180324/149‑1 (MQ=255) ccaggccagCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCt < 5:152958/149‑1 (MQ=255) ccaggccagCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCt > 6:318248/1‑149 (MQ=255) aggccagCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGc > 7:134850/1‑149 (MQ=255) | CCCAGCATGCCTACCGCAACGGCGCTGGGCAGCAGACGCAACATGAGCTCCATGTCCAGCAAAGGCAGCGGGCTGAAAGGCGGGAGTTGCCCGGTGAACGCTGCCACCCGCGGTACATGGCCAAAGAAG‑CCCGGCAGCAGCCAGGCCAGCAAGCTGACCAGGATCAG‑GCTTATCAACAGGCTCGGCCAGCGTGGGCGCCAGAGTTTGAAGGCCGCACCGATCACGACGGTGGCCAGGCCCAGCAGCAAGGAAGGTAGGTCGACCTCGCCTGCGTGGCTGGCCAGGTCCTGC > NC_002947/85918‑86208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |