Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	925,237	G→C	6.1%	A463A (GCC→GCG)	PP_0805 ←	outer membrane efflux protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	925,237	0	G	C	6.1%	213.1 / 3.7	66	A463A (GCC→GCG)	PP_0805	outer membrane efflux protein
Reads supporting (aligned to +/- strand):  ref base G (31/31);  new base C (2/2);  total (33/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

CAACATCACCTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCGTGTCCCTAGGTC  >  NC_002947/925091‑925380                                                                                                                                                   |                                                                                                                                                 cAACATCACCTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAg                                                                                                                                                  <  1:54683/147‑1 (MQ=255)       cACCTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTgcg                                                                                                                                          >  2:217311/1‑149 (MQ=255)          cTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAg                                                                                                                                       >  8:156454/1‑149 (MQ=255)          cTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAACGCCGTGCGCAg                                                                                                                                       >  4:74184/1‑149 (MQ=255)          cTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAACGCCGTGCGCAg                                                                                                                                       >  4:69902/1‑149 (MQ=255)             aaGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAgg                                                                                                                                      <  1:217311/147‑1 (MQ=255)             aaGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAgg                                                                                                                                      <  2:12621/147‑1 (MQ=255)               gCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑gcgc                                                                                                                                 >  2:302158/1‑149 (MQ=255)                    gggCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGgtg                                                                                                                            >  5:36135/1‑149 (MQ=255)                        cAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGtgttg                                                                                                                         >  8:19487/1‑148 (MQ=255)                            gTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAg                                                                                                                    <  7:19487/149‑1 (MQ=255)                             tCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAgg                                                                                                                   <  6:36135/149‑1 (MQ=255)                                            gcggcCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAgg                                                                                                    <  2:23127/149‑1 (MQ=255)                                                ccTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGgcg                                                                                                  >  6:133726/1‑147 (MQ=255)                                                ccTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGgcg                                                                                                  >  4:260850/1‑147 (MQ=255)                                                 cTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGTTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAgg                                                                                                                   >  7:205230/1‑129 (MQ=255)                                                 cTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAgg                                                                                                                   <  8:205230/129‑1 (MQ=255)                                                    cTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCgcag                                                                                               >  6:48399/1‑146 (MQ=255)                                                       cGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATc                                                                                         <  1:302158/149‑1 (MQ=255)                                                             gggCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCg                                                                                   <  7:156454/149‑1 (MQ=255)                                                              ggCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAACGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCgg                                                                                  <  3:69902/149‑1 (MQ=255)                                                              ggCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAACGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCgg                                                                                  <  3:74184/149‑1 (MQ=255)                                                                 gcCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAg                                                                                                                    <  5:176985/112‑1 (MQ=255)                                                                 gcCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAg                                                                                                                    >  6:176985/1‑112 (MQ=255)                                                                   cTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGcc                                                                             <  3:173875/149‑1 (MQ=255)                                                                   cTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGcc                                                                             >  1:173357/1‑149 (MQ=255)                                                                     ggTTGGGGAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGACCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGAAGCAGATCGGAGCgggagatcg                                                                           >  7:3954/1‑143 (MQ=255)                                                                     ggTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCgg                                                                                  <  8:3954/142‑1 (MQ=255)                                                                     ggTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCgg                                                                           >  6:18198/1‑149 (MQ=255)                                                                       ttGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGAGCGGAGCGGGTGCCGGc                                                                          >  8:161029/1‑148 (MQ=255)                                                                           gCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑gcgc                                                                                                                                 >  6:219363/1‑89 (MQ=255)                                                                           gCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑gcgc                                                                                                                                 <  5:219363/89‑1 (MQ=255)                                                                           gCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGtt                                                                     <  5:89153/149‑1 (MQ=255)                                                                            cAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTc                                                                    <  7:212598/149‑1 (MQ=255)                                                                               ggTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAATGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGTAGCGGGTGCCGGCAAGTTCGaa                                                                 <  6:3908/149‑1 (MQ=255)                                                                                   acaTCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGt                                                             <  5:48399/149‑1 (MQ=255)                                                                                     atcgatcgAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGa                                                           <  4:297477/149‑1 (MQ=255)                                                                                     atcgatcgAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGa                                                           >  3:297477/1‑149 (MQ=255)                                                                                     atcgatcgAATCACTCAAGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGa                                                           >  5:257262/1‑149 (MQ=255)                                                                                         atcgaATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGcc                                                                             >  8:276057/1‑127 (MQ=255)                                                                                         atcgaATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGcc                                                                             <  7:276057/127‑1 (MQ=255)                                                                                             aaTCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTgg                                                       >  1:112374/1‑145 (MQ=255)                                                                                                 aCTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACAt                                                                                                         <  6:59348/91‑1 (MQ=255)                                                                                                 aCTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACAt                                                                                                         >  5:59348/1‑91 (MQ=255)                                                                                                  cTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTcc                                              >  5:227639/1‑149 (MQ=255)                                                                                                     aTGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTg                                            <  2:112374/148‑1 (MQ=255)                                                                                                      tGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGAc                                                          <  6:174390/133‑1 (MQ=255)                                                                                                      tGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGAc                                                          >  5:174390/1‑133 (MQ=255)                                                                                                                  cacaCCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCaa                                                                        >  8:298732/1‑107 (MQ=255)                                                                                                                  cacaCCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCaa                                                                        <  7:298732/107‑1 (MQ=255)                                                                                                                  cacaCCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGaa                                                                 <  8:183999/114‑1 (MQ=255)                                                                                                                  cacaCCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGaa                                                                 >  7:183999/1‑114 (MQ=255)                                                                                                                  cacaCCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTg                                  <  2:173357/145‑1 (MQ=255)                                                                                                                   acacCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAg                             >  2:81922/1‑149 (MQ=255)                                                                                                                     acCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGGTGCGCCGGTGTTGTACAGGCAGTCGCCATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAGGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAgg                            >  1:223946/1‑149 (MQ=255)                                                                                                                     acCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGt                           >  2:217590/1‑149 (MQ=255)                                                                                                                          gCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGa                        <  6:227639/147‑1 (MQ=255)                                                                                                                           cAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGc                      <  5:18198/148‑1 (MQ=255)                                                                                                                                 gcgcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGCTCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGcc               >  5:254893/1‑149 (MQ=255)                                                                                                                                 gcgcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGcc               >  4:304042/1‑149 (MQ=255)                                                                                                                                   gcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCa                     >  3:188736/1‑141 (MQ=255)                                                                                                                                   gcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCa                     <  4:188736/141‑1 (MQ=255)                                                                                                                                   gcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCgt             <  1:81922/149‑1 (MQ=255)                                                                                                                                   gcCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCgt             >  1:171993/1‑149 (MQ=255)                                                                                                                                     cccTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACGTCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCgtgt           <  2:242022/149‑1 (MQ=255)                                                                                                                                          aaGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCGTGTCCCt       <  1:217590/148‑1 (MQ=255)                                                                                                                                              ccAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGAAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCGTGTCCCTAGGTc  <  3:260850/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CAACATCACCTCAAGCCAGGGGCCAAGGTCTGGCCGGTGGGCGGCGGCCTGCTCCGGCGCGGGCGCCTGGTTGGGCAGGGTCACATCGATCGAATCACTCATGGCTGGATCTCCACACCTTGCAGGTTGCGCCCCTCAAGGCCAAAGGCCGTGCGCAGG‑GCGCCGGTGTTGTACAGGCAGTCGACATCCAGGCGCAGCAGATCGGAGCGGGTGCCGGCAAGTTCGAAGCGTGACTGGTAGATCTCCTGCTCGGCGTTGAGCAGGTCGAGCAGTGGCCGTGTCCCTAGGTC  >  NC_002947/925091‑925380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑