| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,070,233 | T→C | 6.5% | intergenic (+33/+109) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,070,233 | 0 | T | C | 6.5% | 171.0 / 2.1 | 61 | intergenic (+33/+109) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (26/31); new base C (2/2); total (28/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.57e-01 | |||||||||||
TGGTAGTGATGTACCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGT‑‑GATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTAC > NC_002947/1070085‑1070378 | tGGTAGTGATGTACCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGt > 2:291432/1‑149 (MQ=255) ggTAGTGATGTACCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGtt > 8:19016/1‑149 (MQ=255) tACCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGTAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑t < 6:50385/149‑1 (MQ=255) aCCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCCCTG‑TGCTGTCGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGACAATGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑tg > 1:11366/1‑149 (MQ=255) cTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGACGTTAGGTTTTCGGCGCC‑‑cgt > 5:39840/1‑148 (MQ=255) ccgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGT‑‑Gagatc > 2:258584/1‑144 (MQ=255) gccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGT‑‑Gagatcgag > 6:11700/1‑142 (MQ=255) ttCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGcgccg > 5:115893/1‑149 (MQ=255) cATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCcgcgcg > 7:290606/1‑149 (MQ=255) aTCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCTTTAGGCTTTCATCGCC‑‑TGTGAGATCGAGCGCcgcccgc > 2:33511/1‑148 (MQ=37) ggTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCccgcgcg < 2:197260/147‑1 (MQ=39) tAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGCTTTCATCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGgcgc > 8:44400/1‑149 (MQ=37) aTGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCTTTAGGCTTTCATCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTc < 1:33511/149‑1 (MQ=25) aTGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCt < 7:761/148‑1 (MQ=255) aTGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTc < 3:153819/149‑1 (MQ=255) aTGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCt < 7:96532/148‑1 (MQ=39) tGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTCg < 8:61292/149‑1 (MQ=38) tGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTCg < 1:258584/149‑1 (MQ=38) tGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGCTTTCATCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTCg < 7:44400/149‑1 (MQ=37) gCTGATCCCGGCATGGATCGCTGTTGCTGTGGGTGGCTTTCAAGCTGATGAAGGCTGGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTc > 7:200838/1‑148 (MQ=37) cTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGa < 7:283353/148‑1 (MQ=255) cTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTCGa < 8:200838/148‑1 (MQ=38) tGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAtc > 8:20045/1‑149 (MQ=255) tCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCTATGA‑‑GATCGAGCGCCGCGCGGGCGGCGCTCGATCTca < 1:291432/149‑1 (MQ=255) cGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAtct > 1:119581/1‑144 (MQ=255) cGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAtct < 2:119581/144‑1 (MQ=255) cGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg < 6:115893/149‑1 (MQ=255) cGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAg > 6:14699/1‑149 (MQ=255) gATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATg < 7:19016/148‑1 (MQ=255) ctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGTGCt < 5:274662/121‑1 (MQ=38) ctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGTGCt > 6:274662/1‑121 (MQ=38) gtgggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGc < 4:292231/149‑1 (MQ=255) ggtggCTTTCAAGCTGCAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGCGGATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCCAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt < 5:11700/148‑1 (MQ=38) ggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCCCGTGA‑‑GATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCAt < 6:39840/148‑1 (MQ=255) ggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATg > 5:127486/1‑149 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCg > 2:223025/1‑75 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCg < 1:223025/75‑1 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGcc > 1:135284/1‑149 (MQ=255) cTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCGCGAGCTCACAGGCGATGACAGCCTAAAGGCATGCGTCTGGCGGccc > 5:160224/1‑149 (MQ=38) aagaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGa < 5:14699/149‑1 (MQ=255) agaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGAc < 2:135284/149‑1 (MQ=255) cTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGAGCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTc < 2:132005/149‑1 (MQ=255) tCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTc < 8:233615/93‑1 (MQ=25) tCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCCCGCGCGGCGCTc > 7:233615/1‑93 (MQ=25) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt < 1:203518/94‑1 (MQ=25) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGAt > 2:203518/1‑94 (MQ=25) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATAGAGCGCCGCGCGGGCGGCGCTCGATGTCACCGGCGATGAAAGCCAAAAGGCATGCGGGAGGCGGCCCGGCCGCGTTcccc > 2:153631/1‑149 (MQ=37) ccAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCt > 8:214719/1‑149 (MQ=255) ccAGGCCAAGGGCTCATCGGGTTTGTTCCTAAGGGGTATGCCGTTAGGTTATCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGcc > 3:68508/1‑112 (MQ=25) cAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCtt > 8:19717/1‑149 (MQ=255) ggCCATGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTcc < 4:250986/149‑1 (MQ=255) aaGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGc < 7:20045/149‑1 (MQ=255) gggCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGccc < 6:127486/149‑1 (MQ=255) gATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTTAGATCGAGCGCCGCGCGGGCGGCGCGCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTATGGCGGCCCTGACGAGTTCACCTTCCATGCCCCTCa > 4:169424/1‑148 (MQ=38) tCGGGTTTGTTCGTAAGTGGTTTGGCGTTTGGTTTTGGTCGCC‑‑TGTGAGATCGAGCGCCGCGCGGTCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGTCGGCCCTGACGCGTTCCCCTTCCATGCCACTCAAtg < 2:11366/149‑1 (MQ=37) ggTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTAACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGGCCTGAcgcct > 7:254066/1‑122 (MQ=37) gTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGcc < 8:105954/110‑1 (MQ=255) gTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGcc > 7:105954/1‑110 (MQ=255) gTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTcc > 2:79235/1‑149 (MQ=255) cGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGc < 8:290606/148‑1 (MQ=255) ttAGGTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCGCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtggt < 6:160224/149‑1 (MQ=255) gTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTAc < 1:79235/149‑1 (MQ=255) gTTTTCGGCGCC‑‑TGTGAGATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCAAGCCCCTCAATGCTGCCGACGCCAAGCACCCACAgtgggtta > 6:191142/1‑144 (MQ=37) | TGGTAGTGATGTACCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTG‑TGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGCGCC‑‑TGT‑‑GATCGAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTAC > NC_002947/1070085‑1070378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |