Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,161,013 G→A 6.9% T275T (ACG→ACA gtsC → mannose/glucose ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,161,0130GA 6.9% 167.2 / 2.3 58T275T (ACG→ACAgtsCmannose/glucose ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base G (23/31);  new base A (2/2);  total (25/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

CCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCTGGTGGGCCCGTCGGGCT  >  NC_002947/1160867‑1161161
                                                                                                                                                  |                                                                                                                                                     
ccGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcggc                                                                                                                                                     <  8:119481/149‑1 (MQ=255)
ccGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcggc                                                                                                                                                     >  6:73905/1‑149 (MQ=255)
 cGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcggcc                                                                                                                                                    >  8:143609/1‑149 (MQ=255)
  gctCACCCTAGCCCTGAACAATCTTGGCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATTGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGAcggccg                                                                                                                                                   <  8:124882/147‑1 (MQ=255)
      aCCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGgcgc                                                                                                                                               <  5:73905/149‑1 (MQ=255)
      aCCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCCGGCCGTCAGCCcgcg                                                                                                                                                >  3:214240/1‑148 (MQ=255)
       ccGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCCGGCCGTCAGCCCgcgca                                                                                                                                              <  4:214240/149‑2 (MQ=255)
           aGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTc                                                                                                                                           >  7:198392/1‑148 (MQ=255)
             cccTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAg                                                                                                                                        >  7:248469/1‑149 (MQ=255)
               cTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAggg                                                                                                                                      <  4:226900/149‑1 (MQ=255)
                  aaCAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGt                                                                                                                                    <  8:198392/148‑1 (MQ=255)
                       tCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGGCAAGGGGTAAGCCa                                                                                                                              >  7:263701/1‑149 (MQ=255)
                         tGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATg                                                                                                                            >  5:282761/1‑149 (MQ=255)
                          cgTCAATACCAGCACCGGGGCCAAGGAATACAACCCCGCCCTGCCCGCAGCGATGATCCCTGGCCTGCCAACCCTGCTGCCCTACGTGGAGGCACGCAAATATATCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCAggg                                                                                                                           <  6:242962/148‑1 (MQ=255)
                           gTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATg                                                                                                                            <  5:2241/147‑1 (MQ=255)
                              aaTACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCaa                                                                                                                        <  6:238009/148‑1 (MQ=255)
                                   cAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTc                                                                                                                   >  2:317004/1‑148 (MQ=255)
                                    aGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGa                                                                                                                 <  8:248469/149‑1 (MQ=255)
                                       aCCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACt                                                                                                              >  2:48439/1‑149 (MQ=255)
                                         cGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTc                                                                                                            >  6:212030/1‑149 (MQ=255)
                                         cGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCCGGCCGTCAGCCCgcgca                                                                                                                                              <  5:93154/115‑2 (MQ=255)
                                         cGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCCGGCCGTCAGCCCgcgca                                                                                                                                              >  6:93154/1‑114 (MQ=255)
                                          ggggCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCg                                                                                                           <  6:282761/149‑1 (MQ=255)
                                             gCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCaa                                                                                                        <  3:49457/149‑1 (MQ=255)
                                              ccAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCAt                                                                                                                             <  6:198677/127‑1 (MQ=255)
                                              ccAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCAt                                                                                                                             >  5:198677/1‑127 (MQ=255)
                                                  ggAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGa                                                                                                   <  1:317004/149‑1 (MQ=255)
                                                   gAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGaa                                                                                                  <  5:212030/149‑1 (MQ=255)
                                                        cAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAg                                                                                              <  7:143609/148‑1 (MQ=255)
                                                         aaCGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCTACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCAt                                                                                                                             >  5:132353/1‑116 (MQ=255)
                                                         aaCGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCAt                                                                                                                             <  6:132353/116‑1 (MQ=255)
                                                                aCATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACgg                                                                                      >  6:169680/1‑148 (MQ=255)
                                                                  aTGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGCCGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAg                                                                                   >  8:164417/1‑149 (MQ=255)
                                                                  aTGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCgg                                                                                                                                             <  8:139535/91‑1 (MQ=255)
                                                                  aTGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCgg                                                                                                                                             >  7:139535/1‑91 (MQ=255)
                                                                     gcggcAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGTCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCg                                                                                 <  5:169680/148‑1 (MQ=255)
                                                                     gcggcAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCg                                                                                 <  1:14753/148‑1 (MQ=255)
                                                                        gcAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGAcc                                                                                           <  3:84969/135‑1 (MQ=255)
                                                                        gcAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGAcc                                                                                           >  4:84969/1‑135 (MQ=255)
                                                                           gCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGcc                                                                          <  8:150808/149‑1 (MQ=255)
                                                                             gatgatCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCg                                                                         >  6:53290/1‑148 (MQ=255)
                                                                                  tCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATAcc                                                                   <  3:49136/149‑1 (MQ=255)
                                                                                              cAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATc                                                       >  6:79655/1‑149 (MQ=255)
                                                                                               aaCCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATc                                                       >  5:45402/1‑148 (MQ=255)
                                                                                                 cccTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAg                                                    <  5:53290/149‑1 (MQ=255)
                                                                                                          tCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGAt                                            >  6:133958/1‑148 (MQ=255)
                                                                                                             atgtggtgGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTTAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGt                                                <  2:227992/139‑1 (MQ=255)
                                                                                                             aCGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGGGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTAAAGGACATCCAGCTGTcagat                                           >  1:227992/1‑142 (MQ=255)
                                                                                                              cGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAg                                       <  5:79655/148‑1 (MQ=255)
                                                                                                               gtggtgGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGa                                     >  4:72836/1‑149 (MQ=255)
                                                                                                                 ggtggCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACg                                   >  2:35043/1‑149 (MQ=255)
                                                                                                                     gcaggcaAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGa                               <  8:219022/149‑1 (MQ=255)
                                                                                                                           aaaTATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCt                         >  4:147777/1‑149 (MQ=255)
                                                                                                                             atatTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGa                       <  3:147777/149‑1 (MQ=255)
                                                                                                                                tttCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATc                     <  5:133958/148‑1 (MQ=255)
                                                                                                                                 ttCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCt                         <  6:123043/143‑1 (MQ=255)
                                                                                                                                 ttCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCt                         >  5:123043/1‑143 (MQ=255)
                                                                                                                                     tGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGCACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCtggtg               <  3:231511/149‑1 (MQ=255)
                                                                                                                                     tGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCtggtg               <  3:227243/149‑1 (MQ=255)
                                                                                                                                        gcgGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCTGGTGGGc            <  1:35043/149‑1 (MQ=255)
                                                                                                                                               gACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGGTCCTGATCCTGGTGGGCCCGTCgg     >  4:164929/1‑149 (MQ=255)
                                                                                                                                                aCGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCCAAGGACGGCGAGTTCCTGATCCTGGTGGGCCCGTc       <  1:48439/147‑1 (MQ=255)
                                                                                                                                                 cggccggcGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCTGGTGGGCCCGTCGGGc   <  7:164417/149‑1 (MQ=255)
                                                                                                                                                  ggccggcGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTGCTGATCCTGGTGGGCCCGTCGGGCt  >  8:158173/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
CCGATCACCGTAGCCCTGAACAATCTGGTCAATACCAGCACCGGGGCCAAGGAATACAACGTCGACATGGCGGCAGCGATGATCGCTGGCCTGCCAACCCTGCTGGTCTACGTGGTGGCAGGCAAATATTTCGTGCGCGGGCTGACGGCCGGCGCGGTCAAGGGGTAAGCCATGGCAACGCTCGAACTTCGCAATGTGAACAAGACCTACGGCAGCGGCCTGCCGGATACCCTCAAGGACATCCAGCTGTCGATCAAGGACGGCGAGTTCCTGATCCTGGTGGGCCCGTCGGGCT  >  NC_002947/1160867‑1161161

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: