Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 184,281 G→A 8.9% N94N (AAC→AAT) ‡ PP_0160 ← ferrioxamine receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947184,2810GA 8.9% 156.8 / 4.8 56N94N (AAC→AAT) ‡PP_0160ferrioxamine receptor
Reads supporting (aligned to +/- strand):  ref base G (26/25);  new base A (3/2);  total (29/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.64e-01

GATGTCGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAA  >  NC_002947/184134‑184426
                                                                                                                                                   |                                                                                                                                                 
gATGTCGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGt                                                                                                                                                  >  5:44584/1‑149 (MQ=255)
 aTGTCGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGtt                                                                                                                                                 >  4:279965/1‑149 (MQ=255)
     cGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGtt                                                                                                                                                 <  1:123383/145‑1 (MQ=255)
     cGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGtt                                                                                                                                                 >  2:123383/1‑145 (MQ=255)
        tgtCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATg                                                                                                                                           >  3:90068/1‑148 (MQ=255)
          tCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAg                                                                                                                                        <  6:134486/149‑1 (MQ=255)
            tGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGc                                                                                                                                      >  7:188307/1‑149 (MQ=255)
            tGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGc                                                                                                                                      >  4:95281/1‑149 (MQ=255)
             ggCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAgg                                                                                                                                       <  4:115576/147‑1 (MQ=255)
             ggCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAgg                                                                                                                                       >  3:115576/1‑147 (MQ=255)
                    ccAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGt                                                                                                                               >  7:176405/1‑148 (MQ=255)
                           ggcgTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAg                                                                                                                       <  6:130462/149‑1 (MQ=255)
                           ggcgTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCAGTCAGCTGAg                                                                                                                       <  8:188307/149‑1 (MQ=255)
                                      gCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGAt                                                                                                            <  3:279965/149‑1 (MQ=255)
                                        tgtgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAg                                                                                                          >  8:118417/1‑149 (MQ=255)
                                          tgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAggg                                                                                                        <  6:97288/149‑1 (MQ=255)
                                          tgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAgg                                                                                                         <  8:176405/148‑1 (MQ=255)
                                            ccTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGt                                                                                                       <  8:254755/148‑1 (MQ=255)
                                                         gTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgc                                                                                         <  3:95281/149‑1 (MQ=255)
                                                             cGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCCGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgag                                                                                      <  2:192203/148‑1 (MQ=255)
                                                              gTCCCCCCTGGCTGACGGCTTCCAGTTCGCTGCCATTAAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                     >  3:243749/1‑148 (MQ=255)
                                                                  ccccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATtg                                                                                >  5:128742/1‑149 (MQ=255)
                                                                   cccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                     >  1:81061/1‑143 (MQ=255)
                                                                   cccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                     <  2:81061/143‑1 (MQ=255)
                                                                        gCTGCCGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTg                                                                           <  7:253428/148‑1 (MQ=255)
                                                                        gCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                            <  4:297637/147‑1 (MQ=255)
                                                                            aCGGCTTCCATTCCGCTGCCATGCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGGGATCCCGGCCTGGCGAGCGATTGTGTTGAGCa                                                                       <  4:196162/148‑1 (MQ=255)
                                                                               gCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTc                                                                   <  6:44584/149‑1 (MQ=255)
                                                                                 ttCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCgg                                                                 >  3:284337/1‑149 (MQ=255)
                                                                                       tCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCGCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGtt                                                           <  4:90068/149‑1 (MQ=255)
                                                                                           cTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGAAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGc                                                        >  5:45286/1‑148 (MQ=255)
                                                                                            tGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                            >  4:174901/1‑127 (MQ=255)
                                                                                            tGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                            <  3:174901/127‑1 (MQ=255)
                                                                                              ccATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGc                                                    >  3:301806/1‑149 (MQ=255)
                                                                                                aTTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTg                                                  >  5:10348/1‑149 (MQ=255)
                                                                                                  tCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                            >  6:221921/1‑121 (MQ=255)
                                                                                                  tCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                            <  5:221921/121‑1 (MQ=255)
                                                                                                  tCAGCAACTGGCGCAGCGACTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTgg                                                 >  4:80180/1‑148 (MQ=255)
                                                                                                     gCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTAt                                              >  1:114773/1‑148 (MQ=255)
                                                                                                                aGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGGCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTg                                  <  4:243749/149‑1 (MQ=255)
                                                                                                                      tGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCAc                            >  3:280011/1‑149 (MQ=255)
                                                                                                                        aTCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACtt                          <  4:301806/149‑1 (MQ=255)
                                                                                                                            gCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGc                      >  1:23673/1‑149 (MQ=255)
                                                                                                                             cTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCt                     <  6:10348/149‑1 (MQ=255)
                                                                                                                             cTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCt                     <  2:23673/149‑1 (MQ=255)
                                                                                                                                tgtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCtgtg                  <  6:128742/149‑1 (MQ=255)
                                                                                                                                tgtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCtgt                   <  7:118417/148‑1 (MQ=255)
                                                                                                                                 gtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTgtgt                 >  8:297506/1‑149 (MQ=255)
                                                                                                                                  tACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTc                >  2:46993/1‑149 (MQ=255)
                                                                                                                                       ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg           >  1:134449/1‑149 (MQ=255)
                                                                                                                                       ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg           >  4:24092/1‑149 (MQ=255)
                                                                                                                                       ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg           <  3:24092/149‑1 (MQ=255)
                                                                                                                                         ccTGCATTCCAACGGACTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGGCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc          >  4:90305/1‑148 (MQ=255)
                                                                                                                                         ccTGCATTCCAACGGACTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc          >  1:208014/1‑148 (MQ=255)
                                                                                                                                         ccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc          >  4:266442/1‑148 (MQ=255)
                                                                                                                                                tCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGaaa  <  3:111363/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
GATGTCGGTGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAA  >  NC_002947/184134‑184426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: