Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 184,287 A→C 11.1% H92Q (CAT→CAG PP_0160 ← ferrioxamine receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947184,2870AC11.1% 151.0 / 11.4 54H92Q (CAT→CAGPP_0160ferrioxamine receptor
Reads supporting (aligned to +/- strand):  ref base A (24/24);  new base C (3/3);  total (27/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01

TGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTGCGGAA  >  NC_002947/184142‑184435
                                                                                                                                                 |                                                                                                                                                    
tgtCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATg                                                                                                                                                    >  3:90068/1‑148 (MQ=255)
  tCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAg                                                                                                                                                 <  6:134486/149‑1 (MQ=255)
    tGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGc                                                                                                                                               >  7:188307/1‑149 (MQ=255)
    tGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGc                                                                                                                                               >  4:95281/1‑149 (MQ=255)
     ggCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAgg                                                                                                                                                <  4:115576/147‑1 (MQ=255)
     ggCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCATTCCAACGGACTGCAgg                                                                                                                                                >  3:115576/1‑147 (MQ=255)
            ccAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGt                                                                                                                                        >  7:176405/1‑148 (MQ=255)
                   ggcgTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAg                                                                                                                                <  6:130462/149‑1 (MQ=255)
                   ggcgTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCAGTCAGCTGAg                                                                                                                                <  8:188307/149‑1 (MQ=255)
                              gCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGAt                                                                                                                     <  3:279965/149‑1 (MQ=255)
                                tgtgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAg                                                                                                                   >  8:118417/1‑149 (MQ=255)
                                  tgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAggg                                                                                                                 <  6:97288/149‑1 (MQ=255)
                                  tgCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAgg                                                                                                                  <  8:176405/148‑1 (MQ=255)
                                    ccTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGt                                                                                                                <  8:254755/148‑1 (MQ=255)
                                                 gTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgc                                                                                                  <  3:95281/149‑1 (MQ=255)
                                                     cGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCCGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgag                                                                                               <  2:192203/148‑1 (MQ=255)
                                                      gTCCCCCCTGGCTGACGGCTTCCAGTTCGCTGCCATTAAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                              >  3:243749/1‑148 (MQ=255)
                                                          ccccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATtg                                                                                         >  5:128742/1‑149 (MQ=255)
                                                           cccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                              <  2:81061/143‑1 (MQ=255)
                                                           cccTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGgcgagc                                                                                              >  1:81061/1‑143 (MQ=255)
                                                                gCTGCCGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTg                                                                                    <  7:253428/148‑1 (MQ=255)
                                                                gCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                                     <  4:297637/147‑1 (MQ=255)
                                                                    aCGGCTTCCATTCCGCTGCCATGCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGGGATCCCGGCCTGGCGAGCGATTGTGTTGAGCa                                                                                <  4:196162/148‑1 (MQ=255)
                                                                       gCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTc                                                                            <  6:44584/149‑1 (MQ=255)
                                                                         ttCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCgg                                                                          >  3:284337/1‑149 (MQ=255)
                                                                               tCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCGCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGtt                                                                    <  4:90068/149‑1 (MQ=255)
                                                                                   cTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGAAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGc                                                                 >  5:45286/1‑148 (MQ=255)
                                                                                    tGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                                     >  4:174901/1‑127 (MQ=255)
                                                                                    tGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                                     <  3:174901/127‑1 (MQ=255)
                                                                                      ccATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGc                                                             >  3:301806/1‑149 (MQ=255)
                                                                                        aTTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTg                                                           >  5:10348/1‑149 (MQ=255)
                                                                                          tCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                                     >  6:221921/1‑121 (MQ=255)
                                                                                          tCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGtt                                                                                     <  5:221921/121‑1 (MQ=255)
                                                                                          tCAGCAACTGGCGCAGCGACTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTgg                                                          >  4:80180/1‑148 (MQ=255)
                                                                                             gCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTAt                                                       >  1:114773/1‑148 (MQ=255)
                                                                                                        aGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGGCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTg                                           <  4:243749/149‑1 (MQ=255)
                                                                                                              tGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCAc                                     >  3:280011/1‑149 (MQ=255)
                                                                                                                aTCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACtt                                   <  4:301806/149‑1 (MQ=255)
                                                                                                                    gCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGc                               >  1:23673/1‑149 (MQ=255)
                                                                                                                     cTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCt                              <  6:10348/149‑1 (MQ=255)
                                                                                                                     cTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCt                              <  2:23673/149‑1 (MQ=255)
                                                                                                                        tgtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCtgtg                           <  6:128742/149‑1 (MQ=255)
                                                                                                                        tgtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCtgt                            <  7:118417/148‑1 (MQ=255)
                                                                                                                         gtACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTgtgt                          >  8:297506/1‑149 (MQ=255)
                                                                                                                          tACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTc                         >  2:46993/1‑149 (MQ=255)
                                                                                                                               ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg                    >  1:134449/1‑149 (MQ=255)
                                                                                                                               ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg                    >  4:24092/1‑149 (MQ=255)
                                                                                                                               ccccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCg                    <  3:24092/149‑1 (MQ=255)
                                                                                                                                 ccTGCATTCCAACGGACTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGGCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc                   >  4:90305/1‑148 (MQ=255)
                                                                                                                                 ccTGCATTCCAACGGACTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc                   >  1:208014/1‑148 (MQ=255)
                                                                                                                                 ccTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGc                   >  4:266442/1‑148 (MQ=255)
                                                                                                                                        tCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGaaa           <  3:111363/149‑1 (MQ=255)
                                                                                                                                            ttGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTg       >  3:297496/1‑149 (MQ=255)
                                                                                                                                             cggACTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTGc      <  3:90305/148‑1 (MQ=255)
                                                                                                                                               taaTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTGCgg    <  6:45286/148‑1 (MQ=255)
                                                                                                                                                 aTGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTGCGGaa  >  4:1940/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
TGTCTGGCAATGCCAGGGCGGCGTTCTGACGCTGTGCCTGCAGCACATAGTTACGTCCCCCCTGGCTGACGGCTTCCAGTCCGCTGCCATTCAGCAACTGGCGCAGCGCCTGATCGGCTGTGTACTGCCCCTGCAGTCCGTTGGAATGCAGGCCATCGGTCAGCTGAGGCGTGCTCGATAGGGTGATCCCGGCCTGGCGAGCGATTGTGTTGAGCACGTCGGTCAGTTGGCCAGCTGGTATTGCATAGTGTTGGCTCACTTCGGCTGTGTCGGCCGCAACGGAAAGTTGCGGAA  >  NC_002947/184142‑184435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: