| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,944,530 | T→C | 7.8% | intergenic (+31/+231) | actP‑I → / ← PP_1744 | acetate permease/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,944,530 | 0 | T | C | 7.8% | 218.9 / 6.6 | 77 | intergenic (+31/+231) | actP‑I/PP_1744 | acetate permease/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (35/36); new base C (2/4); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.37e-01 | |||||||||||
TGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATC > NC_002947/1944383‑1944672 | tGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCtt > 2:228546/1‑149 (MQ=255) gTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGt > 2:288351/1‑149 (MQ=255) ctcGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCgg < 3:202468/146‑1 (MQ=255) tCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGtttt < 7:250519/149‑1 (MQ=255) cACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGtttt < 4:104156/148‑1 (MQ=255) cACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGtttt > 3:104156/1‑148 (MQ=255) aCCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGttttt < 1:108806/148‑1 (MQ=255) cGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTAt > 4:144255/1‑149 (MQ=255) cGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGttttcaat < 6:49907/149‑5 (MQ=255) cAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑Tc < 7:288122/149‑1 (MQ=255) tCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCAt < 6:212440/147‑1 (MQ=255) tCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCAt > 5:212440/1‑147 (MQ=255) cAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAg > 3:179865/1‑149 (MQ=255) ggcggcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTC‑GGGCGTTTTTTATT‑TCATGCAGTCgg > 1:20743/1‑149 (MQ=255) ggcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCg < 1:294232/149‑1 (MQ=255) gcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGa < 3:226664/149‑1 (MQ=255) cTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGAt > 4:97587/1‑149 (MQ=255) cTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGttttcaa > 6:186346/1‑128 (MQ=255) cTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGttttcaa < 5:186346/131‑4 (MQ=255) tGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACCGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATg > 3:303174/1‑149 (MQ=255) gATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCt > 5:165390/1‑149 (MQ=255) tGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCTGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTcc < 1:219667/149‑1 (MQ=255) aGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCa < 4:136983/148‑1 (MQ=255) gcgcgcgcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGa < 3:97587/149‑1 (MQ=255) gcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGtt > 3:313673/1‑149 (MQ=255) gcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGtt > 7:293971/1‑149 (MQ=255) tGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTgg > 7:193611/1‑149 (MQ=255) ttcttcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGt < 1:288351/148‑1 (MQ=255) ttcttcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGttt < 7:185848/107‑1 (MQ=255) ttcttcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGACAAGCGGGGCGttt > 8:185848/1‑107 (MQ=255) tcttcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTc > 2:287439/1‑134 (MQ=255) tcttcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTc < 1:287439/134‑1 (MQ=255) cccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTg > 2:25809/1‑149 (MQ=255) cccGCAGTTCGTGCGTTCGCAGACCGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGctct < 4:303174/148‑1 (MQ=255) ccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTg < 6:122214/143‑1 (MQ=255) ccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTg > 5:122214/1‑143 (MQ=255) cAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTCTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGccc < 1:228546/149‑1 (MQ=255) cAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCa < 6:121543/149‑1 (MQ=255) cAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTC‑GGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCAt < 2:20743/149‑1 (MQ=255) gTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATg < 4:158002/145‑1 (MQ=255) gTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATg > 3:158002/1‑145 (MQ=255) cGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGTTGCTCTGCCCATGCTcccc < 4:179865/148‑1 (MQ=255) ttCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCt > 7:230243/1‑142 (MQ=255) ttCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCt < 8:230243/142‑1 (MQ=255) gCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGt > 6:219146/1‑149 (MQ=255) gACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGttt < 8:263455/81‑1 (MQ=255) gACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGttt > 7:263455/1‑81 (MQ=255) aCTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCAt > 7:149517/1‑132 (MQ=255) aCTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCAt < 8:149517/132‑1 (MQ=255) gTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGcc < 4:80958/119‑1 (MQ=255) gTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGcc > 3:80958/1‑119 (MQ=255) gTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGa > 4:303027/1‑140 (MQ=255) gTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGa < 3:303027/140‑1 (MQ=255) ccAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATg < 8:251882/148‑1 (MQ=255) cAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTgg > 4:182115/1‑106 (MQ=255) cAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTgg < 3:182115/106‑1 (MQ=255) gCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg > 2:278741/1‑149 (MQ=255) tAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTggg < 5:21527/146‑1 (MQ=255) tAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTggg > 6:21527/1‑146 (MQ=255) aCATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTg > 3:236664/1‑149 (MQ=255) aTCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTc > 5:97284/1‑99 (MQ=255) aTCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTc < 6:97284/99‑1 (MQ=255) aTCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGCCGGCACATTTGGGGGCTGGt > 8:84793/1‑149 (MQ=255) aTCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAAt > 4:76400/1‑149 (MQ=255) aTCCCCTGCATGGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAAt < 8:293971/149‑1 (MQ=255) cccTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTACAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATg > 6:185105/1‑147 (MQ=255) ccTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAg < 5:219146/149‑1 (MQ=255) ccTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAg > 7:86300/1‑149 (MQ=255) cATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCAt < 6:165390/149‑1 (MQ=255) ataaaaaaCGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACAttt > 2:76217/5‑126 (MQ=255) ataaaaaaCGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACAttt < 1:76217/122‑1 (MQ=255) ttGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCAGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATAc > 6:241670/1‑149 (MQ=255) gAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTGTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCaa > 3:83606/1‑136 (MQ=255) gAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACt < 4:313673/148‑1 (MQ=255) gAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTg > 6:150721/1‑149 (MQ=255) aaaaCGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGt < 5:185105/149‑1 (MQ=255) aaaaCGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACAGCACATTTGGGGGCTGGTCAATGAAGCCATACTg < 3:144255/148‑1 (MQ=255) ccccGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATc < 4:236664/149‑1 (MQ=255) | TGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATT‑TCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATC > NC_002947/1944383‑1944672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |