Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,144,368 G→C 10.6% Q239H (CAG→CAC lpxK → tetraacyldisaccharide 4'‑kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,144,3680GC10.6% 161.2 / 7.9 56Q239H (CAG→CAClpxKtetraacyldisaccharide 4'‑kinase
Reads supporting (aligned to +/- strand):  ref base G (28/22);  new base C (3/3);  total (31/25)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

ACCGCTTGCGTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCACTGCCGCTGG  >  NC_002947/2144223‑2144516
                                                                                                                                                     |                                                                                                                                                    
aCCGCTTGCGTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAgcgc                                                                                                                                                   <  7:246713/149‑1 (MQ=255)
   gCTTGCGTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTg                                                                                                                                                >  2:247740/1‑149 (MQ=255)
    cTTGCGTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGGCTGc                                                                                                                                               <  3:72236/149‑1 (MQ=255)
         gTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCg                                                                                                                                          >  6:197318/1‑149 (MQ=255)
          tGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCgg                                                                                                                                         >  8:270369/1‑149 (MQ=255)
            ttgCTGACGCGGGGCTGTTCAACGGCGCCAGGGTAGACCGCACCGATTGTTTCGGGTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGGGAGCGCCGT‑‑‑GCGGTCGAACATTTTCCCCGCCGGCCAGCGCCTGCATGCGGt                                                                                                                                        <  1:28322/147‑1 (MQ=255)
             ggCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCACCGGCCACCGCATGCAGGCGCTgg                                                                                                                                      >  3:303859/1‑149 (MQ=255)
                 gACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCgg                                                                                                                                  <  1:247740/149‑1 (MQ=255)
                  aCGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCCGCGCCTGCATGCGGTGGCCgg                                                                                                                                  >  2:269011/1‑148 (MQ=255)
                   cgcgGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCACCGCATGCAGGCGCTGGCCggcg                                                                                                                                <  4:41778/149‑3 (MQ=255)
                    gcgGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCACCGGCCACCGCATGCAGGCGCTGGCCggcgg                                                                                                                               <  4:303859/149‑4 (MQ=255)
                      ggTGCTGTTCAACGGCGCCAGCGAAGACCGGACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCg                                                                                                                             >  1:26437/1‑149 (MQ=255)
                                 aCGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCg                                                                                                                             >  3:208561/1‑138 (MQ=255)
                                 aCGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCg                                                                                                                             <  4:208561/138‑1 (MQ=255)
                                     cgcCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAg                                                                                                                                                      >  2:170441/1‑109 (MQ=255)
                                     cgcCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAg                                                                                                                                                      <  1:170441/109‑1 (MQ=255)
                                        cAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTttct                                                                                                           >  1:297593/1‑149 (MQ=255)
                                         aGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCgg                                                                                                                            >  2:91769/1‑131 (MQ=255)
                                         aGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCgg                                                                                                                            <  1:91769/131‑1 (MQ=255)
                                         aGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTttctt                                                                                                          <  3:129932/149‑1 (MQ=255)
                                          gCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTttcttc                                                                                                         <  2:34674/149‑1 (MQ=255)
                                          gCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTttcttc                                                                                                         <  3:16846/149‑1 (MQ=255)
                                            gAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCaa                                                                                                       <  2:297593/149‑1 (MQ=255)
                                                         aTGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTgggg                                                                                          >  6:235838/1‑149 (MQ=255)
                                                           ggtttcggtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGc                                                                                         >  1:95911/1‑148 (MQ=255)
                                                           ggtttcggtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGc                                                                                         >  5:216740/1‑148 (MQ=255)
                                                               tcggtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCACCGGCCACCGCATGCAGGCg                                                                                                                                          >  8:246060/1‑95 (MQ=255)
                                                               tcggtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCACCGGCCACCGCATGCAGGCg                                                                                                                                          <  7:246060/95‑1 (MQ=255)
                                                                  gtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACAcc                                                                                                   <  8:231113/131‑1 (MQ=255)
                                                                  gtttcTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATATCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACAcc                                                                                                   >  7:231113/1‑131 (MQ=255)
                                                                           ggcAGCGGTCGGGCCTTGTCACCGTTGGGACTGGCGAGTGCCGTCTACCCCGCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCg                                                                           <  1:269011/148‑1 (MQ=255)
                                                                             cAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGcc                                                                      <  1:87784/149‑1 (MQ=255)
                                                                                      gCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCg                                                                                                                             >  7:216658/1‑85 (MQ=255)
                                                                                      gCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCg                                                                                                                             <  8:216658/85‑1 (MQ=255)
                                                                                        ccTGGTCAACGTGCGCACTGGCGAGCGGCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCg                                                           <  7:270369/149‑1 (MQ=255)
                                                                                            gTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGa                                                       >  3:139525/1‑149 (MQ=255)
                                                                                                aCGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCAt                                                   <  5:235838/149‑1 (MQ=255)
                                                                                                      gcACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATc                                                                 <  1:192711/129‑1 (MQ=255)
                                                                                                      gcACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATc                                                                 >  2:192711/1‑129 (MQ=255)
                                                                                                        aCTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTCCCGCATCCCTTCGCCGACCATGCGCAGtt                                           >  3:91909/1‑149 (MQ=255)
                                                                                                            gCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCg                                                        <  5:130964/132‑1 (MQ=255)
                                                                                                            gCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCg                                                        >  6:130964/1‑132 (MQ=255)
                                                                                                              gAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGc                                     >  7:160528/1‑149 (MQ=255)
                                                                                                                gcgcCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACGCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGccc                                   <  4:139525/149‑1 (MQ=255)
                                                                                                                 cgcCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCg                                  <  2:26437/149‑1 (MQ=255)
                                                                                                                    cGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAg                               >  4:244563/1‑149 (MQ=255)
                                                                                                                    cGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGAGCTCAACTGGCAGCCGGTGCCTCAAACCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAg                               >  4:13831/1‑149 (MQ=255)
                                                                                                                            gcTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTgg                          >  1:16543/1‑149 (MQ=255)
                                                                                                                             cTCGACCTTTTCCGCGCCGTCCAGCGCCTGCATGCTGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGc                         <  4:91909/149‑1 (MQ=255)
                                                                                                                                 aCCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCtt                      >  4:137042/1‑148 (MQ=255)
                                                                                                                                 aCCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCtt                      >  4:154855/1‑148 (MQ=255)
                                                                                                                                  ccATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGtt                                           <  1:111793/126‑1 (MQ=255)
                                                                                                                                  ccATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGtt                                           >  2:111793/1‑126 (MQ=255)
                                                                                                                                   cATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAg                   <  8:160528/149‑1 (MQ=255)
                                                                                                                                        tCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCg               >  3:222358/1‑149 (MQ=255)
                                                                                                                                          cccGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGc              >  3:142224/1‑148 (MQ=255)
                                                                                                                                           ccgccgGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCa            >  7:285831/1‑149 (MQ=255)
                                                                                                                                             accgGCCACCGCATGCAGGCGCTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCACt          >  1:132996/2‑149 (MQ=255)
                                                                                                                                              ccgGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCACTg         >  2:222889/1‑149 (MQ=255)
                                                                                                                                                     gcgcCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCACTGCCGCTgg  <  2:110948/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ACCGCTTGCGTGAGGCTGACGCGGTGCTGTTCAACGGCGCCAGCGAAGACCGCACCGATGGTTTCGGTTTCTGCCTGCAGCCGTCGGCCCTGGTCAACGTGCGCACTGGCGAGCGCCGT‑‑‑GCGCTCGACCATTTCCCCGCCGGCCAGCGCCTGCATGCGGTGGCCGGTATCGGCAACCCGCAACGTTTCTTCAACACCCTGCTGGGGCTAAACTGGCAGCCGGTGCCGCATCCCTTCGCCGACCATGCGCAGTTCAGTGCCCGGAGCCTGGCCTTCAGCCCGCCACTGCCGCTGG  >  NC_002947/2144223‑2144516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: