Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,261,615 G→C 6.9% A735P (GCC→CCC) ‡ fimV → motility protein FimV

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,261,6150GC 6.9% 184.9 / 3.6 58A735P (GCC→CCC) ‡fimVmotility protein FimV
Reads supporting (aligned to +/- strand):  ref base G (26/28);  new base C (2/2);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

CCGACGAACTGATAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGTTTGATCC  >  NC_002947/2261478‑2261763
                                                                                                                                         |                                                                                                                                                    
ccGACGAACTGATAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAg                                                                                                                                           <  1:263215/149‑1 (MQ=255)
 ctactaaCTGATAATCGCTGAGCCTGTGGTGGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGc                                                                                                                                          <  3:69321/144‑1 (MQ=255)
       aCTGATAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCg                                                                                                                                    <  5:134476/149‑1 (MQ=255)
         tGATAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTg                                                                                                                                  >  3:289306/1‑149 (MQ=255)
           aTAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGa                                                                                                                                <  2:68812/149‑1 (MQ=255)
                     aGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTg                                                                                                                        <  4:74340/147‑1 (MQ=255)
                        cTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTc                                                                                                                   <  1:255218/149‑1 (MQ=255)
                        cTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTc                                                                                                                   <  4:256204/149‑1 (MQ=255)
                          gtgCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGa                                                                                                                 >  5:73622/1‑149 (MQ=255)
                                gATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGa                                                                                                           >  3:6963/1‑149 (MQ=255)
                                    aGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGt                                                                                                        <  4:279646/148‑1 (MQ=255)
                                     gCCCGTACATGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCATCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCa                                                                                                      <  5:246947/149‑1 (MQ=255)
                                     gCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGATCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCa                                                                                                      <  5:251392/149‑1 (MQ=255)
                                        cGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCAGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGa                                                                                                                 <  7:248657/135‑1 (MQ=255)
                                        cGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCAGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGa                                                                                                                 >  8:248657/1‑135 (MQ=255)
                                         gTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGc                                                                                                    >  3:293073/1‑147 (MQ=255)
                                           aCAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGc                                                                                                >  5:247550/1‑149 (MQ=255)
                                             aGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGCCCTGTCTGATTTCGACCTCGACGTCAGCGAGCCg                                                                                              >  5:196611/1‑149 (MQ=255)
                                               gaagaaGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGt                                                                                            >  2:8700/1‑149 (MQ=255)
                                               gaagaaGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGt                                                                                            >  8:155921/1‑149 (MQ=255)
                                               gaagaaGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGt                                                                                            >  3:315765/1‑149 (MQ=255)
                                                  gaagCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGc                                                                                         <  6:73622/149‑1 (MQ=255)
                                                         aGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCgg                                                                                    <  5:55066/147‑1 (MQ=255)
                                                           ccGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGc                                                                                <  7:155921/149‑1 (MQ=255)
                                                              gaagaaCAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGc                                                                                <  2:83505/146‑1 (MQ=255)
                                                              gaagaaCAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGc                                                                                >  1:83505/1‑146 (MQ=255)
                                                               aagaaCAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCt                                                                            <  3:254681/149‑1 (MQ=255)
                                                                 gaaCAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGa                                                                          <  4:293073/149‑1 (MQ=255)
                                                                  aaCAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAg                                                                         <  1:8700/149‑1 (MQ=255)
                                                                    cAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGAc                                                                                                          >  7:220796/1‑114 (MQ=255)
                                                                    cAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGAc                                                                                                          <  8:220796/114‑1 (MQ=255)
                                                                            tGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGa                                                                 <  4:315765/147‑1 (MQ=255)
                                                                             cgtatctaTGCCGAGCTGAAAGCCGACGCCGACGCCGATTTCGATGCCATGCTGGCTCAGGACGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGc                                                               <  8:136628/141‑1 (MQ=255)
                                                                              ccGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAg                                                                                                 >  3:73580/1‑113 (MQ=255)
                                                                              ccGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAg                                                                                                 <  4:73580/113‑1 (MQ=255)
                                                                               cGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGc                                                               >  7:269061/1‑146 (MQ=255)
                                                                                gTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGa                                                           <  8:269061/149‑1 (MQ=255)
                                                                                     tGCCGAGCTGCAAGCCGACGCCGAAGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGCCCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCATGATGCGCTGGAGc                                                               >  7:136628/1‑140 (MQ=255)
                                                                                                          cgacgccgaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTg                                                                   >  4:207151/1‑115 (MQ=255)
                                                                                                          cgacgccgaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTg                                                                   <  3:207151/115‑1 (MQ=255)
                                                                                                            acgccgaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCATGCGGTGGACCTGTCTGATTTCGACATCGACGTCAGCGAGCCGGTTGGAACGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTGACCGCCGCACTGGCt                               >  6:276465/1‑149 (MQ=255)
                                                                                                                cgaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCt                           >  2:42800/1‑149 (MQ=255)
                                                                                                                cgaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCt                           >  8:194864/1‑149 (MQ=255)
                                                                                                                 gaTTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCtt                          <  6:196611/149‑1 (MQ=255)
                                                                                                                      cGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGa                       >  2:77519/1‑147 (MQ=255)
                                                                                                                      cGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACa                     >  4:68501/1‑149 (MQ=255)
                                                                                                                        aGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGc                   >  7:92055/1‑149 (MQ=255)
                                                                                                                            cATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAAc               >  8:34588/1‑149 (MQ=255)
                                                                                                                              tGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCg             <  7:34588/149‑1 (MQ=255)
                                                                                                                              ctgaggCTCGGCCTGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCAccgc                                         >  1:16363/5‑121 (MQ=255)
                                                                                                                              ctgaggCTCGGCCTGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCAccgc                                         <  2:16363/117‑1 (MQ=255)
                                                                                                                              ctgaggCTCGGCCTGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCAccgc                                         <  2:11255/117‑1 (MQ=255)
                                                                                                                              ctgaggCTCGGCCTGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCAccgc                                         >  1:11255/5‑121 (MQ=255)
                                                                                                                                cTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGa           <  8:92055/149‑1 (MQ=255)
                                                                                                                                     tCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGttt       >  6:289661/1‑148 (MQ=255)
                                                                                                                                     gcAGGCTGAGGCTCGGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGttt       >  2:203452/2‑148 (MQ=255)
                                                                                                                                      cAGGCTGAGGCTCGGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGTTTGa     >  3:253468/1‑149 (MQ=255)
                                                                                                                                       aGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGTTTg      <  1:77519/147‑1 (MQ=255)
                                                                                                                                         gCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGTTTGATcc  <  4:289306/149‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                                    
CCGACGAACTGATAATCGCTGAGCCTGTGCTCGATGAGCCCGTACAGGAAGAAGCTCAGCCGGAAGAACAGCCCTTTGCCGTGGATGCCGAGCTGCAAGCCGACGCCGACGCCGATTTCGAGGCCATGCTGGCTCAGGCCGAGCCTCAGCCTGCCGTGGACCTGTCTGATTTCGACCTCGACGTCAGCGAGCCGGTTGCCCCGGCTGCCCCTGAGGCGCTGGAGCAAGATCCGCTGGATGTCACCGCCGAACTGGCTGCCTTCGACAGCGAACCGGAGTTTGATCC  >  NC_002947/2261478‑2261763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑