Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,397,172 A→C 8.5% F829V (TTC→GTC)  PP_2100 ← two‑component system sensor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,397,1720AC 8.5% 183.2 / 7.2 61F829V (TTC→GTC) PP_2100two‑component system sensor protein
Reads supporting (aligned to +/- strand):  ref base A (29/26);  new base C (2/3);  total (32/29)
Fisher's exact test for biased strand distribution p-value = 6.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

TGTCGCGCACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCGGGGCCAGGGAC  >  NC_002947/2397040‑2397320
                                                                                                                                    |                                                                                                                                                    
tGTCGCGCACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGGTTGaa                                                                                                                                                      <  6:142586/133‑1 (MQ=255)
tGTCGCGCACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGaa                                                                                                                                                      >  5:142586/1‑133 (MQ=255)
  tCGCGCACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGc                                                                                                                                      <  5:162602/147‑1 (MQ=255)
    gcgcACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGACCCGCTGCGCTTCAAGCAggt                                                                                                                                  <  3:279136/149‑2 (MQ=255)
              agctccagTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCg                                                                                                                        >  4:137757/1‑149 (MQ=255)
               gctgcagTACGGCTGGTGTGCTGGTTCGGTCATCCAGCGGCCTGACGCTGATGCGCACCTGACGGTGCGCGGGGAGCTTGATGGCGTTGCTGACCAGGTGGGACGGCACCTGCTTGCGGCGGCGCGGGTCAAGCAGGACCTGgcggcgg                                                                                                                       >  4:232779/1‑148 (MQ=255)
               gctccagTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGt                                                                                                                       >  4:216616/1‑149 (MQ=255)
                 tccagTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTgt                                                                                                                     >  5:258946/1‑148 (MQ=255)
                   cagTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCgg                                                                                                                   >  1:99014/1‑149 (MQ=255)
                         ggCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGTGGCCgggg                                                                                                             <  6:258946/149‑1 (MQ=255)
                         ggCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCgggg                                                                                                             <  2:99014/149‑1 (MQ=255)
                              gtgtGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATc                                                                                                        >  6:287580/1‑149 (MQ=255)
                                 tgCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTg                                                                                                      <  7:27523/148‑1 (MQ=255)
                                   cTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGc                                                                                                                         >  3:240731/1‑127 (MQ=255)
                                   cTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGc                                                                                                                         <  4:240731/127‑1 (MQ=255)
                                    tGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCAcc                                                                                                  >  4:235399/1‑149 (MQ=255)
                                       ttCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACATGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTc                                                                                                >  2:223066/1‑148 (MQ=255)
                                          cGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAgg                                                                                            <  4:50268/149‑1 (MQ=255)
                                           gTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAggg                                                                                           >  5:255792/1‑149 (MQ=255)
                                              aTCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAgg                                                                                            >  5:66054/1‑145 (MQ=255)
                                              aTCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAgg                                                                                            <  6:66054/145‑1 (MQ=255)
                                                  agcagcCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGACCCGCTGCGCTTCAAGCAg                                                                                                                                    <  7:81095/101‑1 (MQ=38)
                                                  agcagcCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGACCCGCTGCGCTTCAAGCAg                                                                                                                                    >  8:81095/1‑101 (MQ=38)
                                                   gcagcCTGACGCTGATGCGCACCTGTCCGTGCTCGGTGAACTTGATGGGATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCt                                                                                   <  2:299970/149‑1 (MQ=255)
                                                     agcCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCttt                                                                                 <  3:232779/149‑1 (MQ=255)
                                                       ccTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCt                                                                               >  6:72746/1‑149 (MQ=255)
                                                       ccTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCt                                                                               >  6:302640/1‑149 (MQ=255)
                                                        cTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGc                                                                                                                                               <  1:145244/84‑1 (MQ=255)
                                                        cTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGc                                                                                                                                               >  2:145244/1‑84 (MQ=255)
                                                           aCGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCcg                                                                           >  2:115546/1‑149 (MQ=255)
                                                               tGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTc                                                                                >  1:193781/1‑140 (MQ=255)
                                                               tGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTc                                                                                <  2:193781/140‑1 (MQ=255)
                                                                 aTGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTg                                                                     <  5:287580/149‑1 (MQ=255)
                                                                   gcgcACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCgg                                                                                                                                             <  6:306452/75‑1 (MQ=255)
                                                                   gcgcACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCgg                                                                                                                                             >  5:306452/1‑75 (MQ=255)
                                                                     gcACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTAACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGACAGGCCTTTCTGCCGCGCCTGACCa                                                                 >  5:85454/1‑149 (MQ=255)
                                                                      cACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCAt                                                                >  1:207156/1‑149 (MQ=255)
                                                                       aCCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGTACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAg                                                                                       <  3:310719/125‑1 (MQ=255)
                                                                       aCCTGACCGTGCTCGGTGAAATTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAg                                                                                       >  4:310719/1‑125 (MQ=255)
                                                                           gACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCACCTGACCATCGaa                                                            >  8:302337/1‑148 (MQ=255)
                                                                            aCCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGaaa                                                           <  3:235399/148‑1 (MQ=255)
                                                                                      gTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCAc                                                <  3:216616/149‑1 (MQ=255)
                                                                                          aCTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGa                                             <  6:120820/148‑1 (MQ=255)
                                                                                               aTGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCTCCTGACCATCGAAAATGCGCGCCACCGATTCGa                                        <  7:302337/148‑1 (MQ=255)
                                                                                               aTGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGAc                                       <  7:171741/149‑1 (MQ=255)
                                                                                                tGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGAc                                       >  1:185337/1‑148 (MQ=255)
                                                                                                 ggCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGAcc                                      <  1:115546/148‑1 (MQ=255)
                                                                                                   cATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAgc                                   <  3:137757/149‑1 (MQ=255)
                                                                                                    aTTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAgcg                                  >  8:257545/1‑149 (MQ=255)
                                                                                                    aTTGCTCACCAGGTTGCACAGCACCTGCTTGAAGCCCAGCGGGTCAAGCAGGACATGGCAGCGTGCGTCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTATCTGCCGCGACTGACCATCGAAAATGCGCGCCACCCATTCGACCAgcg                                  >  5:257253/1‑149 (MQ=255)
                                                                                                             cAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGt                         <  2:207156/149‑1 (MQ=255)
                                                                                                                gTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATTGCAGCGTGCGGCGGGGGCGATCTTCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCTCGCCACCGATTCGACCAGCGCCGCCAGGTCGa                      <  6:257253/149‑1 (MQ=255)
                                                                                                                gTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGa                      >  1:136453/1‑149 (MQ=255)
                                                                                                                gTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGAGCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTg                                                                     >  5:100762/1‑102 (MQ=255)
                                                                                                                gTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGACCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTg                                                                     <  6:100762/102‑1 (MQ=255)
                                                                                                                   ggACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTc                                          <  1:32247/126‑1 (MQ=255)
                                                                                                                   ggACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTc                                          >  2:32247/1‑126 (MQ=255)
                                                                                                                         cACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCg             >  2:118028/1‑149 (MQ=255)
                                                                                                                            cTGCTTGACCCGCTGCGCTTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAg                                                                                       <  4:105586/72‑1 (MQ=25)
                                                                                                                            cTGCTTGACCCGCTGCGCTTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAg                                                                                       >  3:105586/1‑72 (MQ=25)
                                                                                                                            cTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCgggg          >  1:72363/1‑149 (MQ=255)
                                                                                                                            cTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCgggg          >  1:308071/1‑149 (MQ=255)
                                                                                                                               cTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCGGGGCCa       <  2:136453/149‑1 (MQ=255)
                                                                                                                                    aGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCGGGGCCAGGGAc  <  2:72363/149‑1 (MQ=255)
                                                                                                                                    |                                                                                                                                                    
TGTCGCGCACCTCCAGCTCCAGTACGGCTGGTGTGCTGGTTCCGTCATCCAGCAGCCTGACGCTGATGCGCACCTGACCGTGCTCGGTGAACTTGATGGCATTGCTCACCAGGTTGGACAGCACCTGCTTGAAGCGCAGCGGGTCAAGCAGGACATGGCAGCGTGCGGCCGGGGCGATCTGCACCTCCAGGGCCAGGCCTTTCTGCCGCGCCTGACCATCGAAAATGCGCGCCACCGATTCGACCAGCGCCGCCAGGTCGACCACCTCCGGGGCCAGGGAC  >  NC_002947/2397040‑2397320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: