Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,522,982	C→A	6.4%	Y1411* (TAC→TAA)	PP_2212 →	leucine‑rich repeat‑containing protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,522,982	0	C	A	6.4%	241.4 / 3.2	76	Y1411* (TAC→TAA)	PP_2212	leucine‑rich repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (33/37);  new base A (2/3);  total (35/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

GCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAACAGCAGGACCTC  >  NC_002947/2522835‑2523126                                                                                                                                                     |                                                                                                                                                   gCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTAc                                                                                                                                                    <  8:216149/148‑1 (MQ=255)         aGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGG‑CCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCAGGTAACGGCGCC‑Aga                                                                                                                                         <  8:155643/149‑2 (MQ=255)          gCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGc                                                                                                                                         <  4:124282/149‑1 (MQ=255)                 gCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACGGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGa                                                                                                                                  >  3:43653/1‑149 (MQ=255)                 gCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGa                                                                                                                                  >  2:220043/1‑149 (MQ=255)                  ccATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGACGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGAc                                                                                                                                 >  2:270093/1‑149 (MQ=255)                   cATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGAc                                                                                                                                 >  6:308104/1‑148 (MQ=255)                      gcgcTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAAc                                                                                                                                      >  3:94109/1‑140 (MQ=255)                      gcgcTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAAc                                                                                                                                      <  4:94109/140‑1 (MQ=255)                       cgcTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCaaa                                                                                                                             <  6:269528/148‑1 (MQ=255)                        gcTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATg                                                                                                                           >  2:165135/1‑149 (MQ=255)                            tCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGtt                                                                                                                         <  7:50415/147‑1 (MQ=255)                              ccGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATCTTCGAt                                                                                                                     >  6:59420/1‑149 (MQ=255)                               cGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTAGATg                                                                                                                    >  7:303877/1‑149 (MQ=255)                                     tGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCt                                                                                                                >  4:90563/1‑147 (MQ=255)                                       tCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGccc                                                                                                                 <  1:231171/144‑1 (MQ=255)                                       tCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGccc                                                                                                                 >  2:231171/1‑144 (MQ=255)                                         gcgcTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGCGGCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACa                                                                                                                                     >  1:233258/1‑123 (MQ=255)                                         gcgcTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCACCATGACCAAATGTTCGATGCCCTCAGTGc                                                                                                          >  7:172434/1‑149 (MQ=255)                                         gcgcTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACa                                                                                                                                     <  2:233258/122‑1 (MQ=255)                                         gcgcTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTg                                                                                                           <  5:308104/148‑1 (MQ=255)                                            cTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgcgc                                                                                                                                              >  5:321098/1‑111 (MQ=255)                                            cTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTgcgc                                                                                                                                              <  6:321098/111‑1 (MQ=255)                                             tGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCAGGTAACGGCGCC‑Agaac                                                                                                                                       <  1:101994/116‑4 (MQ=255)                                             tGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCAGGTAACGGCGCC‑Agaac                                                                                                                                       >  2:101994/1‑113 (MQ=255)                                              gACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGAt                                                                                                      >  4:57545/1‑148 (MQ=255)                                               acacAGGCCCATGTATAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGTCGCCGTTAACTGCGCC‑ATCAACATGACCAAATGTTCGATGCCCTCAGTGCGGAtt                                                                                                     <  5:59420/148‑1 (MQ=255)                                               acacAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGGCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTTCGCCGAGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGa                                                                                                       <  1:220043/147‑1 (MQ=255)                                               acacAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTa                                                                                                    <  1:22025/149‑1 (MQ=255)                                                    ggCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTc                                                                                              <  1:270093/149‑1 (MQ=255)                                                            tAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATg                                                                                                                    <  1:68035/120‑1 (MQ=255)                                                            tAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATg                                                                                                                    >  2:68035/1‑120 (MQ=255)                                                                 gATTCATTTCTGCGGGTTACGC‑GCGCGCAGAACATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGa                                                                                 <  4:43653/149‑1 (MQ=255)                                                                 gATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGa                                                                                 <  4:84811/149‑1 (MQ=255)                                                                    gCATTTCTGCGGGTTACGC‑GCGGGAAGACAATCGAGGGCATGACAGATAGCATAAGCCAGCGCGCGTTCTGGCGCAGTTACCTGCGCC‑AGCAACATGAACAAATGTTCGATGCCCTCAGTGCGGATTACA‑GTCgg                                                                                            >  7:201778/1‑135 (MQ=255)                                                                    gCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCgg                                                                                            <  8:201778/135‑1 (MQ=255)                                                                    gCATTTCTGCGGGTTACGC‑GCGCAAAGACAAAAGAGGGACTGACAAATAGCCTGAGCCAGAGCGCGTTCTGGCGCAGTTAAATGCGCC‑AGCAAAATGAAAAAATGTACGATGCCCTCAGGGGGGTATACA‑CGCGGCGCACGCTTGAGCt                                                                              >  7:202105/1‑149 (MQ=255)                                                                      aTTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTg                                                                             >  1:5257/1‑148 (MQ=255)                                                                       tttCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCa                                                                           <  2:316217/149‑1 (MQ=255)                                                                           tGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAgg                                                                         <  7:83260/147‑1 (MQ=255)                                                                           tGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAgg                                                                         >  8:83260/1‑147 (MQ=255)                                                                             cGGGTTAGGG‑GCGTTCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGGGGGTTGTGGCGCGGTTAGCTGCGCC‑AGATACATGTGCTAATGTTCGTTGGCCTCAGTGCGGATTACA‑TTCGGCGCTGGCTTGAGCTGGAgggta                                                                      <  8:172434/148‑4 (MQ=255)                                                                             cGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTc                                                                      <  3:9929/148‑1 (MQ=255)                                                                             cGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTc                                                                      >  6:65979/1‑148 (MQ=255)                                                                              gggTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCaa                                                                    >  2:38349/1‑149 (MQ=255)                                                                               ggTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAAc                                                                   <  3:90563/149‑1 (MQ=255)                                                                                gTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACg                                                                  >  2:57936/1‑149 (MQ=255)                                                                                   aCGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTc                                                                <  3:113981/148‑1 (MQ=255)                                                                                     gc‑gcgcgcAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTg                                                             >  1:14342/1‑149 (MQ=255)                                                                                        gcgcgcAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACACCTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGt                                                            <  1:57936/149‑1 (MQ=255)                                                                                              aGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGgcg                                                     >  8:17866/1‑149 (MQ=255)                                                                                                  cATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGCCCAAATTTTGGATGCCCTCAGTGGGGTTTACA‑CTCGGCGCACGCTTTAGCTGCCGGCTGAACGTCCTTTCTTGGCGCcgg                                                 >  6:205624/1‑149 (MQ=255)                                                                                                            cTGACCGATAGCCTGCGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCTATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGa                                       <  8:202105/149‑1 (MQ=255)                                                                                                            cTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTc                                         >  2:129834/1‑147 (MQ=255)                                                                                                               aCCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagc                                     <  7:52395/148‑1 (MQ=255)                                                                                                               aCCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGag                                      <  1:129834/147‑1 (MQ=255)                                                                                                               aCCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGag                                      >  7:127829/1‑147 (MQ=255)                                                                                                               aCCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTACGATGCCCTCAGAGCGGATTACA‑CTCGGCGCACCCTTGAGCTGCAGGCACAACGACCAGTCTTGGCGCCGGCGGCCTTCGagca                                    >  7:93738/1‑149 (MQ=255)                                                                                                                ccGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagcag                                   <  7:17866/149‑1 (MQ=255)                                                                                                                 cGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagcagc                                  <  1:165135/149‑1 (MQ=255)                                                                                                                 cGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGagcagc                                  <  2:43506/149‑1 (MQ=255)                                                                                                                        cTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAAc                                                                   <  8:94031/109‑1 (MQ=255)                                                                                                                        cTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAAc                                                                   >  7:94031/1‑109 (MQ=255)                                                                                                                            gCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCgg                       <  1:321040/149‑1 (MQ=255)                                                                                                                             ccAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGc                      <  2:14342/149‑1 (MQ=255)                                                                                                                               aGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTa                    >  3:123800/1‑149 (MQ=255)                                                                                                                                gcgcgcGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTAc                   <  5:205624/149‑1 (MQ=255)                                                                                                                                  gctcgTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCTGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAg                 <  8:303877/146‑1 (MQ=255)                                                                                                                                      gTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGaa              >  1:99495/1‑148 (MQ=255)                                                                                                                                      gTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGaa              >  1:151523/1‑148 (MQ=255)                                                                                                                                       ttCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAAca            >  8:75453/1‑149 (MQ=255)                                                                                                                                         cTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAAcag           <  3:57545/148‑1 (MQ=255)                                                                                                                                          tGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTa                    >  5:22697/1‑138 (MQ=255)                                                                                                                                          tGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTa                    <  6:22697/138‑1 (MQ=255)                                                                                                                                            gcgcCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAACAGCAgg       <  5:65979/149‑1 (MQ=255)                                                                                                                                                cGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAACAGCAGGACCt   <  2:5257/149‑1 (MQ=255)                                                                                                                                                 gTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAACAGCAGGACCTc  <  7:75453/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GCCCAACCAGCCGTATGCCATGCGCTATCCCGATGCTGTCGCGCTGACACAGGCCCAGGTAGAGGATGCATTTCTGCGGGTTACGC‑GCGCGCAGACCATCGAGGGCCTGACCGATAGCCTGAGCCAGCGCGCGTTCTGGCGCCGTTACCTGCGCC‑AGCAACATGACCAAATGTTCGATGCCCTCAGTGCGGATTACA‑CTCGGCGCACGCTTGAGCTGCAGGCTCAACGTCCTGTCTTGGCGCCGGCGGCCTTCGAGCAGCAACTACGCCGGCTACAGGAACAGCAGGACCTC  >  NC_002947/2522835‑2523126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑