Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 244,423 G→A 7.1% A33A (GCG→GCA algP → transcriptional regulator AlgP

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947244,4230GA 7.1% 162.6 / 2.2 56A33A (GCG→GCAalgPtranscriptional regulator AlgP
Reads supporting (aligned to +/- strand):  ref base G (27/25);  new base A (2/2);  total (29/27)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.71e-01

AGCAGAAGCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCGGTG  >  NC_002947/244277‑244571
                                                                                                                                                  |                                                                                                                                                    
agcagAAGCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCgct                                                                                                                                                    >  2:136743/1‑149 (MQ=255)
    gAAGCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCgctggct                                                                                                                                                >  2:238794/1‑149 (MQ=255)
       gCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGGCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGAt                                                                                                                                             <  5:191613/149‑1 (MQ=255)
       gCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGAt                                                                                                                                             >  1:238412/1‑149 (MQ=255)
       gCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGAt                                                                                                                                             >  2:91618/1‑149 (MQ=255)
         aTAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGc                                                                                                                                           >  6:211846/1‑149 (MQ=255)
         aTAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGc                                                                                                                                           <  2:81923/149‑1 (MQ=255)
          tAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCg                                                                                                                                          >  8:266014/1‑149 (MQ=255)
           aGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCg                                                                                                                                          >  5:20968/1‑148 (MQ=255)
                 aGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGaaaaa                                                                                                                                    <  1:26458/148‑1 (MQ=255)
                 aGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGaaaaa                                                                                                                                    <  6:20968/148‑1 (MQ=255)
                  ggcGCTATCTAGTCAGCCAGGAGGTAAACCATGTCGGCAAATAAGAATCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGGAGCTTGCTAGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGGTGATGCGGAAAAAct                                                                                                                                  <  8:229616/147‑1 (MQ=255)
                  gCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAAct                                                                                                                                  <  1:136743/149‑1 (MQ=255)
                    cGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCgg                                                                                                                                         <  5:14993/140‑1 (MQ=255)
                    cGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCgg                                                                                                                                         >  6:14993/1‑140 (MQ=255)
                       aaTCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTgg                                                                                                                             <  1:91618/149‑1 (MQ=255)
                                  ccAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGa                                                                                                                   >  2:308367/1‑148 (MQ=255)
                                   cAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGGTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGaa                                                                                                                  >  3:236498/1‑148 (MQ=255)
                                            aaCCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGt                                                                                                         <  7:239009/148‑1 (MQ=255)
                                              ccATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTgg                                                                                                       >  8:23361/1‑148 (MQ=255)
                                                          aaaaGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGa                                                                                           >  8:27726/1‑148 (MQ=255)
                                                             agaagCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGaaaac                                                                                       >  3:121486/1‑148 (MQ=255)
                                                                  ccAGTAAGTACGCGGTTACACATGCTACAGCAACTTTCGGTCAGCTTGCTCGAACACTTGGAAGAGGCCTTCTCGAAAGAGCTGTCTGATGCTGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCATGGCAAg                                                                                                   <  2:243788/132‑1 (MQ=255)
                                                                  ccAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCATGGCAAg                                                                                                   >  1:243788/1‑132 (MQ=255)
                                                                            cGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGc                                                                        <  2:238412/149‑1 (MQ=255)
                                                                                    cacCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACt                                                                <  1:238794/149‑1 (MQ=255)
                                                                                      ccTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGc                                                              <  1:308367/149‑1 (MQ=255)
                                                                                       cTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGc                                                              >  2:5879/1‑148 (MQ=255)
                                                                                        tGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCGGCGGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAACAACTGCCCACCGGTCGCCTGAACCTGCac                                                            >  2:125640/1‑148 (MQ=255)
                                                                                           tCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAc                                                         >  7:302373/1‑149 (MQ=255)
                                                                                             cAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAcgc                                                       >  1:71542/1‑149 (MQ=255)
                                                                                             cAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAcgc                                                       >  6:141657/1‑149 (MQ=255)
                                                                                              aGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGa                                                          >  4:280269/1‑145 (MQ=255)
                                                                                              aGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGa                                                          <  3:280269/145‑1 (MQ=255)
                                                                                              aGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAcgcg                                                      >  5:187523/1‑149 (MQ=255)
                                                                                              aGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAcgcg                                                      >  8:48805/1‑149 (MQ=255)
                                                                                                cAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGc                                                    <  7:27726/149‑1 (MQ=255)
                                                                                                   cTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCaa                                                 <  2:71542/149‑1 (MQ=255)
                                                                                                    tttCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAg                                                >  3:167704/1‑149 (MQ=255)
                                                                                                      tCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCCGAAACTGCAAGACGCGGCCAAg                                                <  7:48805/147‑1 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGcc                                    >  7:53371/1‑148 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGc                                     <  7:266014/147‑1 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCACTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAc                                                         >  4:198240/1‑127 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCACTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAc                                                         >  6:251040/1‑127 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCACTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAc                                                         <  3:198240/127‑1 (MQ=255)
                                                                                                                 gCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCACTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGAc                                                         <  5:251040/127‑1 (MQ=255)
                                                                                                                  cTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGcc                                    >  3:156858/1‑147 (MQ=255)
                                                                                                                    cGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTg                                                                                    <  3:114653/97‑1 (MQ=255)
                                                                                                                    cGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTg                                                                                    >  4:114653/1‑97 (MQ=255)
                                                                                                                          cTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCa                            >  6:250933/1‑147 (MQ=255)
                                                                                                                           ttGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAg                                                           >  2:239538/1‑115 (MQ=255)
                                                                                                                           ttGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAg                                                           <  1:239538/115‑1 (MQ=255)
                                                                                                                               aaGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAg                     <  7:23361/149‑1 (MQ=255)
                                                                                                                                 gagGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGgc                   <  4:156858/149‑1 (MQ=255)
                                                                                                                                    gCCTGCTCGCAAGCGCTGGCTGATGCGCAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGgcgtc                >  7:11722/1‑147 (MQ=255)
                                                                                                                                         cTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCaaaaa            <  6:187523/148‑1 (MQ=255)
                                                                                                                                             cAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCAt       <  5:250933/149‑1 (MQ=255)
                                                                                                                                               aGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCg     <  1:125640/149‑1 (MQ=255)
                                                                                                                                                 cgcTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCAGAACCTGCAAGACGCGGCCAAGGCAGGTTAAGCCACGGCGCAAAGCAAGGCGCAAAACGCGATCGGt   >  6:182217/1‑149 (MQ=255)
                                                                                                                                                  gctggctgATGCGGAAAATCTGCTGGCGTAGTTGGAAAATCAGGGTGGCAAGGCGCAGGAAAAACTGCACAACGGGCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCGGTg  <  5:182217/149‑1 (MQ=255)
                                                                                                                                                  gctggctgATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCg     <  6:292072/146‑1 (MQ=255)
                                                                                                                                                  gctggctgATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGACTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCg     >  5:292072/1‑146 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
AGCAGAAGCATAGTATGAGCCGCAATCTCGTCAGCCAGGAGGTAAACCATGTCGGCCAAAAAGAAGCCAGTAAGTACGCCGTTACACCTGCTCCAGCAACTTTCGGGCAGCTTGCTCGAACACTTGGAAGAGGCCTGCTCGCAAGCGCTGGCTGATGCGGAAAAACTGCTGGCGAAGTTGGAAAAGCAGCGTGGCAAGGCGCAGGAAAAACTGCACAACGGTCGCCTGAAACTGCAAGACGCGGCCAAGGCAGGTAAAGCCAAGGCGCAAAGCAAGGCGCAAAAAGCCATCGGTG  >  NC_002947/244277‑244571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: