| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,172 | A→T | 6.0% | intergenic (+57/+26) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,172 | 0 | A | T | 6.0% | 230.9 / 2.4 | 77 | intergenic (+57/+26) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (37/35); new base T (2/3); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.45e-01 | |||||||||||
CGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATG > NC_002947/36039‑36319 | cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt < 1:200985/148‑1 (MQ=255)cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt < 7:142790/148‑1 (MQ=255) gACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtgtt < 1:11319/149‑2 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGc > 5:318406/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt < 5:297703/149‑1 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt > 6:297703/1‑149 (MQ=255) aGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGACAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt < 1:62433/149‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCt > 4:36150/1‑146 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCt < 3:36150/146‑1 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑g > 2:168201/1‑148 (MQ=255) aacaaacaACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑gg > 6:34534/1‑148 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAt‑t > 5:152692/1‑149 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAt‑t > 3:41800/1‑149 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAt‑t > 7:250446/1‑149 (MQ=255) caacaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt > 8:120905/1‑134 (MQ=255) caacaaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt < 7:120905/134‑1 (MQ=255) caaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGATTTTTTTGGCTG‑GGAAT‑TTTGCCt > 7:146228/1‑149 (MQ=255) aGTCGCTCAAGAGGAAATGAATGTAAGCAAGGATGGTATGTATCAAGCCGACAATTAATCGGCGGTTAATTAGGACTTCAAATCAGGAATGA‑AATCGTCAAAAAAGCGATCGGATAAGCTGGCTTTTTTGTGGTT‑GTAAT‑TTTGCCTTc < 8:267084/149‑1 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑g > 3:102339/1‑130 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑g < 4:102339/130‑1 (MQ=255) cAAGATCAAAAGAAAGCAACCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTg < 8:146228/149‑1 (MQ=255) cAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGc > 8:250328/1‑149 (MQ=255) aaagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAAGCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGAGAGGCGt > 3:17619/1‑149 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtgt > 7:256275/1‑115 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTtgt < 8:256275/115‑1 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGtt > 2:44729/1‑149 (MQ=255) aaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGAAGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGtt‑tac > 1:40463/1‑147 (MQ=255) gaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCa < 4:146654/149‑1 (MQ=255) aaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCAt < 8:250446/149‑1 (MQ=255) aaagCAACGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCAt < 8:262891/149‑1 (MQ=255) aagCAAGGATTGTAATGAACAAGCAGAAAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCAtt < 6:273091/149‑1 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCAt < 6:318406/148‑1 (MQ=255) cAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTg > 7:294388/1‑147 (MQ=255) cAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTg < 8:294388/147‑1 (MQ=255) cAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCt < 1:168201/149‑1 (MQ=255) ggTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCg > 8:301130/1‑149 (MQ=255) aaCAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGAc > 8:187735/1‑149 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCg < 7:187735/149‑1 (MQ=255) gCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGAGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCg > 8:186698/1‑149 (MQ=255) cGACAATTAATCCGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGCGTAAAACCTGGCTTTTATGTCCAT‑GGAAT‑TTAGCCTTCGTACTTGAGAGGCGTT‑TCC‑GCTTAGCTTTCTCCGGCCAGACCCACgcc > 6:94655/1‑147 (MQ=255) ttAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtg > 4:246538/1‑149 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCg > 1:35464/1‑149 (MQ=255) ggctgTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGTGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 6:140885/149‑1 (MQ=255) ggTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCg > 6:5610/1‑149 (MQ=255) aaaTAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGttt < 1:44729/148‑1 (MQ=255) aTAGGACTTCAAATGACGTAAGA‑AATCGACAAAAAAGCCATGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCCAGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc < 1:237428/149‑1 (MQ=255) tAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa < 4:41800/149‑1 (MQ=255) gACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 3:246538/149‑1 (MQ=255) cTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca < 3:230389/149‑1 (MQ=255) ttCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGc > 8:157703/1‑135 (MQ=255) ttCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGc < 7:157703/135‑1 (MQ=255) aaaTGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTTCTCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgggg < 1:67599/132‑1 (MQ=255) aaaTGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgggg > 2:67599/1‑131 (MQ=255) aaaTGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCAAATGGCAcag > 6:114872/1‑148 (MQ=255) aCGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTAGGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagcag > 1:79898/1‑147 (MQ=255) gaaaga‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 2:311618/136‑1 (MQ=255) gaaaga‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 1:311618/1‑136 (MQ=255) gaaaga‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAg > 5:54218/1‑147 (MQ=255) aaaga‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagca > 1:164828/1‑142 (MQ=255) aaaga‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagca < 2:164828/142‑1 (MQ=255) aga‑aaTCGACAAAAAAGCCAGCGTAAAACCTCCCTTTATTGTGCTT‑GGAATAGTAGCCTTCGTACTTCCGAGGCCTT‑TCC‑GCAATGCTTACTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctcg > 1:84756/1‑147 (MQ=255) a‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcaca < 7:21438/135‑1 (MQ=255) a‑aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcaca > 8:21438/1‑135 (MQ=255) agcaCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCg > 3:120008/4‑149 (MQ=39) aaaaacGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑TGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑ACATTGCTTTCTCCGGCCAGACCCTCGGCACCTtgtg < 6:212729/106‑1 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 1:70194/1‑123 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 2:70194/123‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc > 8:156986/1‑149 (MQ=255) aaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg > 2:275634/1‑138 (MQ=255) aGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCgg < 7:250328/149‑1 (MQ=255) aGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCgg < 6:152692/149‑1 (MQ=255) aGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGAt < 2:79898/149‑1 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCTTTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATg < 1:241779/111‑1 (MQ=255) ggTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATg > 2:241779/1‑111 (MQ=255) tAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 3:96495/149‑1 (MQ=255) tAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt > 5:217955/1‑149 (MQ=255) tAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 6:54218/149‑1 (MQ=255) aaagCCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtg > 2:305388/1‑149 (MQ=255) | CGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGA‑AATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTT‑GGAAT‑TTAGCCTTCGTTCTTGCGAGGCGTT‑TCC‑GCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATG > NC_002947/36039‑36319 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |