Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,208,281	G→A	5.7%	A644T (GCG→ACG)	PP_2812 →	transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,208,281	0	G	A	5.7%	210.0 / 2.2	70	A644T (GCG→ACG)	PP_2812	transporter
Reads supporting (aligned to +/- strand):  ref base G (33/33);  new base A (2/2);  total (35/35)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.69e-01

TGGACGCCGCCAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCGGTGATGG  >  NC_002947/3208138‑3208428                                                                                                                                                |                                                                                                                                                    tggACGCCGCCAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCcgctctc                                                                                                                                                >  6:254125/1‑145 (MQ=255)     cgccgcCAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCgcgc                                                                                                                                            <  3:286365/149‑1 (MQ=255)      gccgccAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCCCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATc                                                                                                                                                >  1:155610/1‑144 (MQ=255)      gccgccAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCCCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATc                                                                                                                                                <  2:155610/144‑1 (MQ=255)        cgccAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCAGGCTGCTGTATGTCTATGCCGCGATCGCgctgc                                                                                                                                         >  5:75625/1‑149 (MQ=255)            aaGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGgt                                                                                                                                     <  2:259560/149‑1 (MQ=255)              ggCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGgtgt                                                                                                                                   <  2:276638/149‑1 (MQ=255)                  tttCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGc                                                                                                                               >  5:292244/1‑149 (MQ=255)                    tCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGcc                                                                                                                              <  5:16363/148‑1 (MQ=255)                      gCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGt                                                                                                                            <  4:102061/148‑1 (MQ=255)                          cGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGATGGTGTTCGCCGTCTa                                                                                                                         >  6:239307/1‑147 (MQ=255)                              tATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGa                                                                                                                   >  3:165768/1‑149 (MQ=255)                                  cGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTCTTCGCCGTCTACCGCGACCTg                                                                                                               >  6:266002/1‑149 (MQ=255)                                   gCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGc                                                                                                              >  6:82321/1‑149 (MQ=255)                                   gCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCACGATCTCGCTGCTGGTGTTCGACGTATACCTCGACCTGc                                                                                                              >  6:311371/1‑149 (MQ=255)                                   gCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCACGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGc                                                                                                              >  6:315949/1‑149 (MQ=255)                                           gcctgTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTg                                                                                                      >  4:283822/1‑149 (MQ=255)                                            cctgTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGc                                                                                                     <  4:165768/149‑1 (MQ=255)                                              tgTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTg                                                                                                   >  3:49126/1‑149 (MQ=255)                                                tCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGt                                                                                                 >  2:195968/1‑149 (MQ=255)                                                tCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGt                                                                                                 >  3:85301/1‑149 (MQ=255)                                                   aTCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCg                                                                                                                             >  5:152544/1‑118 (MQ=255)                                                   aTCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCg                                                                                                                             <  6:152544/118‑1 (MQ=255)                                                      cgcctcgcctCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTttgtt                                                                                            <  5:52042/148‑1 (MQ=255)                                                       gcctcgcctcGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTtgc                                                                                          <  3:283822/149‑1 (MQ=255)                                                        cctcgcctcgGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTtgcc                                                                                         >  4:191732/1‑149 (MQ=255)                                                         ctcgcctcgGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATcg                                                                                                                                               <  6:138352/94‑1 (MQ=255)                                                         ctcgcctcgGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATcg                                                                                                                                               >  5:138352/1‑94 (MQ=255)                                                            gcctcgGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTtgcctg                                                                                       <  5:82321/147‑1 (MQ=255)                                                             cctcgGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTgcctgcct                                                                                    >  7:73027/1‑149 (MQ=255)                                                                 gggCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGa                                                                                <  6:292244/149‑1 (MQ=255)                                                                   gCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGAc                                                                               >  3:63721/1‑148 (MQ=255)                                                                    cAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGActa                                                                             <  5:78034/149‑3 (MQ=255)                                                                     aaCGCCGGCGTGCTGGCCGCTATCAACGAAGACGTGGAGAAGAGCGCAACTCCCATGCTGCTGTCTGGCTATGCCGCGAGCGCGCTGGTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCAt                                                                            <  6:75625/149‑1 (MQ=255)                                                                        gCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTtgc                                                                                          <  2:84775/132‑1 (MQ=255)                                                                        gCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTtgc                                                                                          >  1:84775/1‑132 (MQ=255)                                                                                   ggCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCAt                                                                <  6:19121/147‑1 (MQ=255)                                                                                   ggCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCAt                                                                >  5:19121/1‑147 (MQ=255)                                                                                    gCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCgg                                                             >  4:163444/1‑149 (MQ=255)                                                                                    gCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCCGCCTTTGACCATCGGCACCTTCATc                                                               <  4:49126/147‑1 (MQ=255)                                                                                     ccGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCtt                                                                                   <  5:242451/126‑1 (MQ=255)                                                                                     ccGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCAATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCtt                                                                                   >  6:242451/1‑126 (MQ=255)                                                                                             aaCGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGt                                                     >  2:229507/1‑148 (MQ=255)                                                                                              aCGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTgg                                                                                                  <  6:238088/102‑1 (MQ=255)                                                                                              aCGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTgg                                                                                                  >  5:238088/1‑102 (MQ=255)                                                                                              aCGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGtt                                                    >  1:146831/1‑148 (MQ=255)                                                                                              aCGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGtt                                                    >  1:158431/1‑148 (MQ=255)                                                                                                gaagaaGTGGAGAATAGCGAAACTCCCATGCTGCTGTATGTCTATGCCACGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCTGCTACTGGTTCAt                                                 <  5:311371/149‑1 (MQ=255)                                                                                                gaagaaGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCACGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCAt                                                 <  5:315949/149‑1 (MQ=255)                                                                                                gaagaaGGGGCGAAGAGCGAAACTCCCATGCTGCTGTATGGCTATGCCGCGATCGCGCTGCTGGGGTTCGCCGGCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCAt                                                 <  4:78976/149‑1 (MQ=255)                                                                                                   gaagTGGAGAAGAGGGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCTCTGCTTGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTTCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGa                                               <  5:266002/148‑1 (MQ=255)                                                                                                           gaagaGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGc                                      <  3:191732/149‑1 (MQ=255)                                                                                                             agagCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTAGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCa                                     <  1:229507/148‑1 (MQ=255)                                                                                                              gagCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTTGTTTGTTGCCTGCCTTTGACCATCGTCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGa                                   <  5:239307/149‑1 (MQ=255)                                                                                                              gagCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGaa                                              <  2:227913/138‑1 (MQ=255)                                                                                                              gagCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTg                                       >  2:318460/1‑145 (MQ=255)                                                                                                              gagCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTAGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGaa                                              >  1:227913/1‑138 (MQ=255)                                                                                                                 cGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCg                                <  1:195968/149‑1 (MQ=255)                                                                                                                       tCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGAAGATCGGCCTGa                          >  7:141565/1‑149 (MQ=255)                                                                                                                         ccATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGttt                                                                                               <  2:209712/78‑1 (MQ=255)                                                                                                                         ccATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGttt                                                                                               >  1:209712/1‑78 (MQ=255)                                                                                                                         ccATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGa                          <  2:146831/147‑1 (MQ=255)                                                                                                                           aTGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTg                                                       >  4:193065/1‑116 (MQ=255)                                                                                                                           aTGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTg                                                       <  3:193065/116‑1 (MQ=255)                                                                                                                                gctgTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTa                 >  5:156528/1‑149 (MQ=255)                                                                                                                                 ctgTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCt                  <  1:318460/147‑1 (MQ=255)                                                                                                                                 ctgTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTAc                <  4:63721/149‑1 (MQ=255)                                                                                                                                        tCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCg         >  8:142174/1‑149 (MQ=255)                                                                                                                                         cTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCgg        >  5:103913/1‑149 (MQ=255)                                                                                                                                          tATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGAGCTGGTTTGTTGCCTGCCTATGACCATAGGCACCTTGATCGGCTCCTGGTTCATGATGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCGGt       >  7:83779/1‑149 (MQ=255)                                                                                                                                            tGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCgg        <  6:103913/146‑1 (MQ=255)                                                                                                                                               cgcgATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCGGTGATgg  >  7:41287/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    TGGACGCCGCCAAGGCGTTTCGCAGCGACTATCCGCAGCCTGGCCTGTCGATCCGCCTCGCCTCGGGCAACGCCGGCGTTCTGGCCGCTATCAACGAAGAAGTGGAGAAGAGCGAAACTCCCATGCTGCTGTATGTCTATGCCGCGATCGCGCTGCTGGTGTTCGCCGTCTACCGCGACCTGCGGGCAGTGCTGGTTTGTTGCCTGCCTTTGACCATCGGCACCTTCATCGGCTACTGGTTCATGAAGGAACTGCAGATCGGCCTGACCATTGCTACCTTGCCGGTGATGG  >  NC_002947/3208138‑3208428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑