Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,912,561 T→G 5.1% C303G (TGC→GGC) ‡ PP_3452 → GGDEF domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,912,5610TG 5.1% 257.6 / 3.3 79C303G (TGC→GGC) ‡PP_3452GGDEF domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base T (39/36);  new base G (2/2);  total (41/38)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01

CGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGCACACTGGCAAGG  >  NC_002947/3912413‑3912702
                                                                                                                                                    |                                                                                                                                             
cGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCtgt                                                                                                                                               <  2:243400/149‑1 (MQ=255)
 gTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCtgtg                                                                                                                                              >  1:89218/1‑149 (MQ=255)
  tGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGc                                                                                                                                             <  2:79338/149‑1 (MQ=255)
    ggCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGc                                                                                                                                             >  1:315461/1‑147 (MQ=255)
      cgacgaAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAgc                                                                                                                                         >  5:9164/1‑149 (MQ=255)
       gacgaAGTGCTCAAGCGCGTGGCCCTACATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAgcg                                                                                                                                        <  2:184457/149‑1 (MQ=255)
         cgaAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGcgcg                                                                                                                                      >  7:28710/1‑149 (MQ=255)
              tGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTgcgc                                                                                                                                 <  8:80373/149‑1 (MQ=255)
                 tCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAg                                                                                                                              >  4:95024/1‑149 (MQ=255)
                   aaGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAgg                                                                                                                             <  7:102070/148‑1 (MQ=255)
                    aGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGGCACAGcgcgg                                                                                                                                     <  5:161395/139‑2 (MQ=255)
                    aGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGGCACAGcgcgg                                                                                                                                     >  6:161395/1‑138 (MQ=255)
                     gcgcGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCGGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGATGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACg                                                                                                                          >  7:54602/1‑149 (MQ=255)
                                     atCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGt                                                                                                          >  8:124931/1‑149 (MQ=255)
                                      tCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGt                                                                                                          >  4:52321/1‑148 (MQ=255)
                                      tCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGt                                                                                                          >  7:94700/1‑148 (MQ=255)
                                      tCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTc                                                                                                         >  8:257611/1‑149 (MQ=255)
                                       cAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCa                                                                                                        >  6:183147/1‑149 (MQ=255)
                                        aaGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCAc                                                                                                       <  2:89218/149‑1 (MQ=255)
                                        aaGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCAc                                                                                                       >  3:192558/1‑149 (MQ=255)
                                         aGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCAcc                                                                                                      <  7:257611/149‑1 (MQ=255)
                                         aGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCAc                                                                                                       >  8:19124/1‑148 (MQ=255)
                                          gACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCAcc                                                                                                      >  2:114884/1‑148 (MQ=255)
                                           aCAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCAGTCACCAt                                                                                                    <  7:21019/149‑1 (MQ=255)
                                             aaGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCa                                                                                                  <  5:183147/149‑1 (MQ=255)
                                               gCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAg                                                                                                 >  7:17074/1‑148 (MQ=255)
                                                  tGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCAtt                                                                                             <  6:305588/149‑1 (MQ=255)
                                                  tGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCAtt                                                                                             <  1:114884/149‑1 (MQ=255)
                                                    gCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtgg                                                                                           <  1:121023/149‑1 (MQ=255)
                                                    gCCGATCAGGCGTTAGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtgg                                                                                           >  8:263366/1‑149 (MQ=255)
                                                     ccGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggc                                                                                          <  4:311231/149‑1 (MQ=255)
                                                        aTCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggcctg                                                                                       <  3:95024/149‑1 (MQ=255)
                                                        aTCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggcctg                                                                                       <  4:192558/149‑1 (MQ=255)
                                                        aTCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggcctg                                                                                       <  7:263366/149‑1 (MQ=255)
                                                        aTCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggcctg                                                                                       <  6:21480/149‑1 (MQ=255)
                                                        aTCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATtggcctg                                                                                       <  5:73343/149‑1 (MQ=255)
                                                         tCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCa                                                                                                  <  2:108774/137‑1 (MQ=255)
                                                         tCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCa                                                                                                  >  1:108774/1‑137 (MQ=255)
                                                               gTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAgg                                                                                >  2:222715/1‑149 (MQ=255)
                                                                   gCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGGCGCTGGCGAGCACCCGGTGCCCGTCAGCATTGGCCTGGCCAAGGTCGa                                                                            >  8:237107/1‑149 (MQ=255)
                                                                     ccGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCg                                                                                                                    <  4:69118/107‑1 (MQ=255)
                                                                     ccGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCg                                                                                                                    >  3:69118/1‑107 (MQ=255)
                                                                      cGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATc                                                                                                   >  6:310736/1‑123 (MQ=255)
                                                                      cGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATc                                                                                                   <  5:310736/123‑1 (MQ=255)
                                                                             gAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGGCGACCGGGga                                                                     >  6:110201/1‑146 (MQ=255)
                                                                                  gAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCt                                                             >  4:234817/1‑149 (MQ=255)
                                                                                  gAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCt                                                             >  3:33951/1‑149 (MQ=255)
                                                                                  gAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCt                                                             >  7:121560/1‑149 (MQ=255)
                                                                                    agagTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTa                                                           <  7:124931/149‑1 (MQ=255)
                                                                                       gTTCGCGATCTTCATCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAACATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTacca                                                        <  2:298466/149‑1 (MQ=255)
                                                                                        ttCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTaccac                                                       >  5:296563/1‑149 (MQ=255)
                                                                                           gcgATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCAt                                                                                                    >  6:157383/1‑101 (MQ=255)
                                                                                           gcgATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCAt                                                                                                    <  5:157383/101‑1 (MQ=255)
                                                                                           gcgATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACcgc                                                    >  6:117063/1‑149 (MQ=255)
                                                                                                 ttcttcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCtt                                                            >  4:269215/1‑135 (MQ=255)
                                                                                                 ttcttcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCtt                                                            <  3:269215/135‑1 (MQ=255)
                                                                                                  tcttcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTc                                             >  8:167684/1‑149 (MQ=255)
                                                                                                   cttcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCgcgc                                                  <  4:33951/143‑1 (MQ=255)
                                                                                                   cttcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGAGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTcc                                            >  1:43654/1‑149 (MQ=255)
                                                                                                     tcGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCcgc                                          >  2:196971/1‑149 (MQ=255)
                                                                                                      cGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCAGCGCggtggtaagg                                          <  6:9164/148‑5 (MQ=255)
                                                                                                       gAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCgcgc                                        <  2:315461/149‑1 (MQ=255)
                                                                                                        aaGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGTGAGAGAGCCCTACCACCGCGCTGGTCCGCGcc                                       <  8:17074/149‑1 (MQ=255)
                                                                                                        aaGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGcc                                       <  3:234817/149‑1 (MQ=255)
                                                                                                             cTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCa                                  <  8:121560/149‑1 (MQ=255)
                                                                                                                gATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACcgcg                                                   >  4:175127/1‑129 (MQ=255)
                                                                                                                gATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACcgcg                                                   <  3:175127/129‑1 (MQ=255)
                                                                                                                gATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAgg                                >  2:271112/1‑148 (MQ=255)
                                                                                                                      cAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATtata                         <  5:110201/149‑1 (MQ=255)
                                                                                                                           ggCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAg                    >  2:15741/1‑149 (MQ=255)
                                                                                                                           ggCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAg                    >  8:34895/1‑149 (MQ=255)
                                                                                                                               gAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCaa                <  8:94700/149‑1 (MQ=255)
                                                                                                                                agcagcGAGTGGCAGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAg               <  8:54602/149‑1 (MQ=255)
                                                                                                                                 gcagcGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCAGGGAGAGAGCCTTACCAGCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGc              >  5:276755/1‑149 (MQ=255)
                                                                                                                                  cagcGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGca             >  6:36957/1‑149 (MQ=255)
                                                                                                                                  cagcGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGca             <  2:43654/149‑1 (MQ=255)
                                                                                                                                        gTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGCACACTgg       >  2:204681/1‑149 (MQ=255)
                                                                                                                                          gcacgcgCTGGCACAGCGCGTGCGCTAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCaa                <  7:131329/135‑1 (MQ=255)
                                                                                                                                          gcacgcgCTGGCACAGCGCGTGCGCTAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCaa                >  8:131329/4‑138 (MQ=255)
                                                                                                                                           gCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGCACACTGGc      >  2:106271/1‑147 (MQ=255)
                                                                                                                                             cgcgCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGCACACTGGCAAgg  <  1:222715/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
CGTGGGCGACGAAGTGCTCAAGCGCGTGGCCCTGCATATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCACCATCAGCATTGGCCTGGCCAAGGTCGACCGGGGAGAGAGCCTTACCACCGCGCTGGTCCGCGCCGATCAGGCATTATATGAAGCCAAGCACACTGGCAAGG  >  NC_002947/3912413‑3912702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑