New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2301454	0 (0.000)	33 (1.160)	32/286	0.1	100%	intergenic (‑98/‑233)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein
	?	NC_002947	5545321 =	NA (NA)					intergenic (‑461/+416)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

CCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGG  >  NC_002947/5545176‑5545460                                                                                                                                                  |                                                                                                                                            ccTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGtcttct                                                                                                                                           >  5:129740/1‑148 (MQ=32) ccTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGtcttct                                                                                                                                           <  8:25216/148‑1 (MQ=32) ccTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGtcttct                                                                                                                                           <  6:33891/148‑1 (MQ=32)  cTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTa                                                                                                                                          >  5:41953/1‑148 (MQ=32)           ttGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATcaaaca                                                                                                                                   >  8:51791/1‑146 (MQ=38)                ttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCTACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATa                                                                                                                            >  2:75829/1‑148 (MQ=255)                ttctggcttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATa                                                                                                                            >  5:109100/1‑148 (MQ=255)                      cttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAAcc                                                                                                                         <  3:3024/145‑1 (MQ=255)                       ttcGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACt                                                                                                                     >  3:77274/1‑148 (MQ=255)                                ctcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGttcttt                                                                                                              >  4:137861/1‑146 (MQ=255)                                ctcAAGACATTGTTCAACATAAGCCTTATTCTTGGTTAACAGGTTGTAAACCAGACGTGCCCACTGATGCGCAGTGTCTTTGATGGAGCAGCTTGTATACATTCGAGTCAGTATTCTATCTAACAAAAGATAACACACTGttcttt                                                                                                              >  8:70735/1‑146 (MQ=17)                                 tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTTATGCGCAGTGTCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa                                                                                                           <  5:29420/148‑1 (MQ=255)                                 tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGCTAACCCACTGTTCTTTCTa                                                                                                           >  5:48183/1‑148 (MQ=255)                                 tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa                                                                                                           >  7:144478/1‑148 (MQ=255)                                 tcAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTa                                                                                                           >  7:89349/1‑148 (MQ=255)                                    aGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAg                                                                                                          <  7:25118/146‑1 (MQ=255)                                        cTTGTTCAACCTAAGCCTGCTTCGTGGTTAACAGGTTGTACACCAGCCGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaa                                                                                                    <  8:90136/148‑1 (MQ=255)                                        cTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaa                                                                                                    <  4:119829/148‑1 (MQ=255)                                            ttCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGaaaaaaa                                                                                                 <  8:89349/147‑1 (MQ=255)                                             tCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGAAGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAAc                                                                                                <  5:18610/147‑1 (MQ=255)                                               aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAgg                                                                                             >  6:71368/1‑148 (MQ=255)                                               aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg                                                                                              <  4:119044/147‑1 (MQ=255)                                               aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg                                                                                              <  8:108798/147‑1 (MQ=255)                                               aaCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAg                                                                                              <  1:69003/147‑1 (MQ=255)                                                aCATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgc                                                                                            >  2:160818/1‑148 (MQ=255)                                                    aaGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGgcgcgc                                                                                        >  1:63042/1‑148 (MQ=255)                                                      gCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCgg                                                                                      <  6:109100/148‑1 (MQ=255)                                                       ccTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCggg                                                                                     <  6:75107/148‑1 (MQ=255)                                                            ttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCaa                                                                                >  4:76002/1‑148 (MQ=255)                                                            ttcttGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCaa                                                                                >  8:55851/1‑148 (MQ=255)                                                                  gTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGGCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGC‑AAAAAAACAGGCGCGCGGGGTCAATggc                                                                            <  8:141441/145‑1 (MQ=255)                                                                      aCAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa                                                                      >  6:109663/1‑148 (MQ=255)                                                                       cAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa                                                                      <  2:7076/147‑1 (MQ=255)                                                                       cAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGaa                                                                      <  6:129740/147‑1 (MQ=255)                                                                        aGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCTCGCGGGGTCAATGGCGGCGAAgt                                                                    >  8:82565/1‑148 (MQ=255)                                                                        aGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgt                                                                    <  5:67410/148‑1 (MQ=255)                                                                         ggTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg                                                                   >  6:7095/1‑148 (MQ=255)                                                                         ggTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACACACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtg                                                                   >  5:130754/1‑148 (MQ=255)                                                                          gTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAgtgt                                                                  >  5:78477/1‑148 (MQ=255)                                                                              tACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCa                                                               <  6:78477/147‑1 (MQ=255)                                                                              tACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCAc                                                              >  8:108448/1‑148 (MQ=255)                                                                                    aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttct                                                        >  1:50000/1‑148 (MQ=255)                                                                                    aGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACtcttct                                                        <  5:62724/148‑1 (MQ=255)                                                                                         tGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGGCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAACACCGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACg                                                   >  7:103228/1‑148 (MQ=255)                                                                                          gCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGt                                                  >  2:77533/1‑148 (MQ=255)                                                                                            cAACAGATGCTCAGTGGCTTTGATGGCGCAGCTGGTATCAATTCGAGTCAGTCTTCTATCAAACAAAAGATACCCCACTGTTCTTTCTAGAGAAAAAAACAGGCGCGAGGCTTAAATGGCGGCGAAGTGTTAACTCTTCATTACGTgg                                                >  7:103008/1‑148 (MQ=18)                                                                                                tGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTc                                              >  1:42023/1‑146 (MQ=255)                                                                                                   tGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTcaca                                           <  7:51791/146‑1 (MQ=255)                                                                                                           gggtttGATGGCGCAGCTGTTATCCATTCTATTCATTCTTCTATCAAACAAAAGATAACCCACTGTTATTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCtgt                                  <  1:70786/144‑1 (MQ=14)                                                                                                             cTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGcc                               <  3:137861/148‑1 (MQ=255)                                                                                                             cTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGc                                <  6:114724/147‑1 (MQ=255)                                                                                                             cTTTGATGGAGCATCTGGTATCCATTCGAGTCAGTATTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGTTCAATGGCTGCGAAGTGTTCACTCTTCTATACGTGGGCACAGCAAGCTGTGc                                <  5:146199/147‑1 (MQ=17)                                                                                                                   tGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAg                          <  7:55851/147‑1 (MQ=255)                                                                                                                     gcgcAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGa                       >  3:93682/1‑148 (MQ=255)                                                                                                                      cgcAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAACACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGAt                      <  1:34981/148‑1 (MQ=255)                                                                                                                          gCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAAc                  <  1:160818/148‑1 (MQ=255)                                                                                                                                aTCCATTCGAGTCAGTCTTCTATCAAACAAAAGATACCCCCCTGTGCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGAt            <  6:140852/148‑1 (MQ=255)                                                                                                                                    aTTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCa        >  5:17046/1‑148 (MQ=39)                                                                                                                                        gAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCAttt     <  6:41953/147‑1 (MQ=35)                                                                                                                                          gtcagtcTTCTAACAAACAAAAGATAACCCACTCTTCTTTCTACCGAAAAAAACAGGCGCGCGGGCTCAATGGCGGCGAAGTCTTCACTCTTCTATACCTGCTCACAGCAAGCAGTGCCGACAGGGATTAACGCCGATCCCATTTgcg  >  4:55362/1‑146 (MQ=11)                                                                                                                                                  |                                                                                                                                            CCTGCCGGTCTTGGCTTCTGGCTTCGAACTCCTCAAGACCTTGTTCAACATAAGCCTGCTTCTTGGTTAACAGGTTGTACACCAGACGTGCCAACTGATGCGCAGTGGCTTTGATGGCGCAGCTGGTATCCATTCGAGTCAGTCTTCTATCAAACAAAAGATAACCCACTGTTCTTTCTAGCGAAAAAAACAGGCGCGCGGGGTCAATGGCGGCGAAGTGTTCACTCTTCTATACGTGGTCACAGCAAGCTGTGCCGACAGGGATTAACGCCGATGCCATTTGGG  >  NC_002947/5545176‑5545460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.