| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 1 (0.010) | 51 (0.770) +CGGG |
46/276 | 0.6 | 98.1% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 1 (0.010) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCA > NC_002947/5681271‑5681559 | aCCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgg < 1:55249‑M1/148‑4 (MQ=255)aCCGTAATACATGAAAACAAACACCTCCTGATGTGGGCTAACTTCCTGTTGTGATACAGATATCTTCGTTATTTCATGT‑‑ACCCGC‑‑CTATTGTCGCCAAAGGGGCGCGAAGCGGCCCAAAGCTTACAATGCCACTCCATCAACcgccgct > 8:343933/1‑145 (MQ=255) ccGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcgggg > 7:351379‑M1/1‑144 (MQ=255) tAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTGGCGCAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCCATGCATGAACCGCcggggctg > 4:274933‑M1/1‑141 (MQ=255) tAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CATGTGTCGCGAAAGGGGCGCCAAGCGGCCCCAGGCTTTAATTGCCAATGCATTAACCGCcggggctg > 5:286359‑M1/1‑141 (MQ=255) aaTACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGGGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggcggc > 8:350157‑M1/1‑140 (MQ=255) aTACATGCAAACACAGACCTCCTGAGGTTGGCTGGGTTCCTGTTGTGATTCTGTTGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgct < 7:343933‑M1/149‑11 (MQ=255) tACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAAAACGGCGAATTGTGCAAGGATAGGGGCGCGAAGCGGCCCCAGGCTTTAATTGACACTGAATGAACagccggggct > 1:324708/1‑142 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACAGCATGAACCGCcgggggagctgcgcag > 1:302627‑M1/1‑133 (MQ=255) gCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCAGTGGCACTGCATGAACCGCcggggctgctgcgcag > 3:239363‑M1/1‑133 (MQ=255) aaaCACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgcgcagcagcc > 7:189871‑M1/1‑131 (MQ=255) cacaGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgcgcagcagccccg < 8:189871‑M1/149‑22 (MQ=255) aGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgc < 3:250294‑M1/139‑15 (MQ=255) aGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgc > 4:250294‑M1/1‑125 (MQ=255) ctcctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgac < 7:317237‑M1/149‑29 (MQ=255) cctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcga > 2:345296‑M1/1‑119 (MQ=255) cctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcga < 1:345296‑M1/146‑28 (MQ=255) ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTACCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacac > 5:173377‑M1/1‑118 (MQ=255) ctGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTACCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacac > 5:167392‑M1/1‑118 (MQ=255) gggCTGGGTTCCTGTTGTGATGCGGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgc < 5:290635‑M1/149‑39 (MQ=255) ggCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgct < 1:248221‑M1/149‑40 (MQ=255) ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgc > 3:261779‑M1/1‑105 (MQ=255) ggTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgc < 4:261779‑M1/117‑13 (MQ=255) cTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTTTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTAATTGACACTGCATGAACCGCcggggcttcttcgcagccctatagcgacacaatgccgctcccacta > 7:231650‑M1/1‑100 (MQ=255) ttgtGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagac > 1:305281‑M1/1‑97 (MQ=255) aTGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcg > 1:135976‑M1/1‑86 (MQ=255) aTGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcg < 2:135976‑M1/99‑14 (MQ=255) gtgGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatccta < 1:263209‑M1/148‑78 (MQ=255) cgcGGC‑‑CTGGGGGCGCTAATGGGGCGCTAAGGGGCCCCAGGCTTTCATTCCCACTGCATCAACCGCgggggctgctgcgcagccctatcgctacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaag < 7:350157‑M1/148‑84 (MQ=255) gttggggcgctAATGGGGCGGCATGCGGCCCCAGGCTTTAATTCCCACTGCTTCAACCGCCGGGGCTGCGGCGAAGCCCTAGCGCGAAAAATGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAgg < 2:324708/142‑1 (MQ=255) cTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagcccgatcgcgacacaaggccgctcccactaccgacccccaggcccggcggctgccctcctaaccaaggtccgg > 8:159150‑M1/1‑60 (MQ=255) ttGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgccgcccaatagcgccacaaggccgctcccacgccacaccccccggcccagccccgcacaacctaaccaaggtcaggt > 2:189669‑M1/1‑59 (MQ=255) gcgAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttg > 5:150264‑M1/1‑52 (MQ=255) gggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtc > 6:142305‑M1/1‑45 (MQ=255) ggCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagcccaccaggccctgcgccgcacatcctaacccagggcagggtgcagctccgcgtcc > 8:187221‑M1/1‑44 (MQ=255) cgcgAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgccacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaacccaggtcaggttgcagatccgcgtcacg > 8:124865‑M1/1‑42 (MQ=255) ccacgcggcCCCAGGCTTACATTGCCCCTCAATTAACCGCgggggcgggtgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgca < 8:351379‑M1/145‑110 (MQ=255) gCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc > 3:97274‑M1/1‑36 (MQ=255) gCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatc < 4:97274‑M1/134‑99 (MQ=255) cccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagccttt < 5:142305‑M1/149‑119 (MQ=255) cccAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggcccggcgccgcacatcctaaccaaggtcac > 4:120884‑M1/1‑31 (MQ=255) cctggcttTAATTGCCACTGCATCAACCGCcgggggtgctgcgcagccctatcgcgaaaaatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttc < 2:52529‑M1/146‑120 (MQ=255) cAGGCTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttcc < 7:187221‑M1/149‑121 (MQ=255) cTTTCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacccaaggccgctcccactccagaccacccggccctgggcctcacctcctaaccaaggtcaggttgcagatccgcgtcacgcgccagcctttccaatg > 6:196150‑M1/1‑25 (MQ=255) cTTTCATTCCAACTGCAGGACCCGCgggggctgctgcgcagccctagcgcgacacatggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatg < 4:126503‑M1/149‑125 (MQ=255) tCATTGCCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgc < 1:189669‑M1/147‑126 (MQ=255) aTTACCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgac < 6:173377‑M1/148‑129 (MQ=255) aTTACCACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgac < 6:167392‑M1/148‑129 (MQ=255) ccACTGCATGAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggt > 7:201799‑M1/1‑16 (MQ=255) gAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaat > 5:383067‑M1/1‑7 (MQ=255) gAACCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaat < 6:383067‑M1/130‑124 (MQ=255) aaCCGCcggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtaccc < 6:150264‑M1/148‑143 (MQ=255) aCCGCcggggctgctgcgaagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgc < 6:286359‑M1/149‑145 (MQ=255) gccggggctgctgcgcagccctatcgcgacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgcccaggtccggtacccgcgcc > 7:118059‑M1/1‑2 (MQ=255) ccggggctgctgcgcagccctatcgcaacacaaggccgctcccactccagaccaccaggccctgcgcctcacatcctaaccaaggtcaggttgcagatccgcgtcacgcaccagcctttccaatgcgaccaggtccggtacccgcgcca > 1:5817‑M1/1‑1 (MQ=255) | ACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGG‑‑AGCGGC‑‑CTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCA > NC_002947/5681271‑5681559 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |