New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4808174 =	3 (0.040)	9 (0.180)	6/214	6.6	33.2%	intergenic (‑283/‑272)	PP_4234/dsbD‑II	bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2
	?	NC_002947	= 5988935	34 (0.660)					intergenic (+229/‑317)	kefB‑III/PP_mr64	glutathione‑regulated potassium/H+ antiporter/C4 ncRNA
Rejected: Coverage evenness skew score above cutoff.

CTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAAT  >  NC_002947/5988790‑5989079                                                                                                                                                  |                                                                                                                                                  cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAccc                                                                                                                                                >  7:369260/1‑149 (MQ=255) cTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAc                                                                                                                                                  <  3:348257/147‑1 (MQ=255)    cGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCcgc                                                                                                                                              <  6:382823/148‑1 (MQ=255)     gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCcgcg                                                                                                                                             >  1:147636/1‑148 (MQ=255)      tttgtttgGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGAACAAACAAGGCGGTCGCGCGCGCCTGGCACAGTAGGGATTGGCCATAAACAAACGTAGGAGCGGTTTTACCCGCGaa                                                                                                                                           <  2:248500/149‑1 (MQ=25)            tCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGcgccgc                                                                                                                                    >  1:369544/1‑149 (MQ=14)             cGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCACGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTCGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCcgc‑g                                                                                                                                  >  4:80448/1‑149 (MQ=9)                 ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAgcg                                                                                                                                        >  8:229622/1‑141 (MQ=255)                 ccAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAgcg                                                                                                                                        <  7:229622/141‑1 (MQ=255)                   aGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑gcgggc                                                                                                                             >  7:53160/1‑149 (MQ=255)                    gTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑gcgggcg                                                                                                                            <  2:147636/149‑1 (MQ=255)                    gTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTAAACCcgctcctac                                                                                                                                        <  3:322926/138‑7 (MQ=255)                    gTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTAAACCcgctcctac                                                                                                                                        >  4:322926/1‑132 (MQ=255)                          ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGGCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAATCGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGggcggc                                                                                                                          <  3:306902/145‑1 (MQ=255)                          ccTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCGCGATATCGCGTCGTACAAACAAGGCGGGCGCGCGCGCCTGGCACAGGAGGGAGTGGCCAGAAACAAACGTAGGCGCGGGTGTCCCCGCGAAGCGCCGC‑GCGGgcggcgagc                                                                                                                      >  4:306902/1‑146 (MQ=38)                           cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTc                                                                                                                      >  6:240712/1‑148 (MQ=255)                                 gACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCa                                                                                                               <  2:184828/149‑1 (MQ=255)                                    gcgcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATgg                                                                                                            <  1:274539/149‑1 (MQ=255)                                      gcACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGgc                                                                                                          >  3:150501/1‑149 (MQ=255)                                              gCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCaaa                                                                                                   >  7:270342/1‑148 (MQ=255)                                               cgccttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGgcgc                                                                                                                        >  7:236824/6‑125 (MQ=17)                                               cgccttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGgcgc                                                                                                                        <  8:236824/120‑1 (MQ=17)                                               cccccTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCaaaaa                                                                                                 >  8:351736/1‑149 (MQ=255)                                                 ccttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCac                                                                                                              <  7:49874/130‑2 (MQ=17)                                                 ccttGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCac                                                                                                              >  8:49874/4‑132 (MQ=17)                                                        gcACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCCAAAACTATCGc                                                                                          >  2:259919/1‑147 (MQ=255)                                                                 gATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTg                                                                                >  4:102302/1‑148 (MQ=255)                                                                   tatCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGaa                                                                             <  1:160990/149‑1 (MQ=255)                                                                             tACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGc                                                                   <  8:270342/149‑1 (MQ=255)                                                                                aaacaaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAAt                                                                >  2:222473/1‑149 (MQ=255)                                                                                   caaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCCAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTc                                                             <  1:259919/149‑1 (MQ=255)                                                                                    aaGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTcc                                                            >  7:148424/1‑149 (MQ=255)                                                                                       gCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGa                                                         >  6:311375/1‑149 (MQ=255)                                                                                         ggTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGAc                                                        >  2:41673/1‑148 (MQ=255)                                                                                          gTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGa                                                      <  7:351736/149‑1 (MQ=255)                                                                                           tCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGAt                                                     <  5:311375/149‑1 (MQ=255)                                                                                                       ggCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgccgc                                          >  3:224549/1‑148 (MQ=255)                                                                                                        gtgcaGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGAtctc                                                                                                                <  1:282301/73‑1 (MQ=11)                                                                                                        gtgcaGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGAtctc                                                                                                                >  2:282301/4‑76 (MQ=11)                                                                                                        gCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTcgccgc                                          <  3:102302/147‑1 (MQ=255)                                                                                                         cacaGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCAt                                       <  4:224549/149‑1 (MQ=255)                                                                                                            aggaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAc                                    <  5:240712/149‑1 (MQ=255)                                                                                                             ggaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcg                                   >  8:182132/1‑149 (MQ=255)                                                                                                             ggaggGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGAcg                                   >  2:180627/1‑149 (MQ=255)                                                                                                                        ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATc                                                                       <  2:284932/102‑1 (MQ=255)                                                                                                                        ccAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTcaca                         >  1:301909/1‑148 (MQ=255)                                                                                                                              acaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCa                  >  1:251921/1‑149 (MQ=255)                                                                                                                              acaaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCa                  >  4:280027/1‑149 (MQ=255)                                                                                                                               caaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGGCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGcc                                                                          >  1:261828/1‑93 (MQ=255)                                                                                                                               caaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGcc                                                                          <  2:261828/92‑1 (MQ=255)                                                                                                                               caaacGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCAt                 <  4:150501/149‑1 (MQ=255)                                                                                                                                      aGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAAt          >  6:201467/1‑149 (MQ=255)                                                                                                                                       ggAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATc         <  1:41673/149‑1 (MQ=255)                                                                                                                                        gAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATTGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATc         <  8:53160/148‑1 (MQ=255)                                                                                                                                        gAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCg        >  4:202550/1‑149 (MQ=255)                                                                                                                                             ggTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTaa   <  3:280027/149‑1 (MQ=255)                                                                                                                                              gTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCAGAAATCGTCTAAt  >  1:139452/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGC‑GCGGGCGGCGCTCGATCTCATGGGCGCCCAAAAACTATCGCCAGGCACCTGGAAGCCATCCTGCAATTTCCTGACGATCACCTCGCCGCCATGACGCGAACTCACAAAAACCATCACAAATCGTCTAAT  >  NC_002947/5988790‑5989079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.