Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,348,7050AG38.4% 90.1 / 99.0 100intergenic (‑70/+404)PP_3820/galUgroup II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase
Reads supporting (aligned to +/- strand):  ref base A (34/27);  new base G (21/17);  total (55/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

ATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCAC  >  NC_002947/4348595‑4348852
                                                                                                              |                                                                                                                                                    
aTTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGGTAACCGCCCCTTACTACGGCTTCGGCGGACTTCTGCACGCTCGTCCCGTCGCCGTTCGACGCGCGGTAGCACAGTGGCCAg                                                                                                                >  8:167405/1‑149 (MQ=11)
 ttACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGc                                                                                                               <  6:274990/149‑1 (MQ=33)
     ggTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTAc                                                                                                           <  3:290493/149‑1 (MQ=21)
     ggTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTa                                                                                                            >  5:157624/1‑148 (MQ=34)
       ttACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAg                                                                                                         <  2:176568/149‑1 (MQ=21)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAtct                                                                                                     >  8:119159/1‑149 (MQ=21)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAtct                                                                                                     >  4:98350/1‑149 (MQ=21)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAtc                                                                                                      >  4:103769/1‑148 (MQ=21)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTAc                                                                                                           <  6:117354/143‑1 (MQ=34)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTAc                                                                                                           >  5:117354/1‑143 (MQ=34)
           cAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGCTGGCGCCGTTAACCGCCACTTACTACGCCTTCGACTCACTTCTCCACGCTCGTCCCGACCCCTTTCGACGCCCGGTAGCACAGTGGCAAGAGTACAGAtc                                                                                                      >  4:11981/1‑148 (MQ=11)
            aaCGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAtctc                                                                                                    >  5:357790/1‑149 (MQ=21)
             aCGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTcc                                                                                                   >  7:361732/1‑149 (MQ=21)
                agaCGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCTACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAg                                                                                               >  6:99703/1‑149 (MQ=21)
                agaCGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAg                                                                                               <  3:90141/149‑1 (MQ=34)
                     gCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTaa                                                                                          >  5:188296/1‑149 (MQ=34)
                      cGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGGGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAAt                                                                                         >  5:334986/1‑149 (MQ=21)
                           ccTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcg                                                                                    <  6:357790/149‑1 (MQ=21)
                           ccTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcg                                                                                    <  5:27713/149‑1 (MQ=34)
                           ccTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcg                                                                                    <  6:279997/149‑1 (MQ=34)
                            cTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcgc                                                                                   <  4:312094/149‑1 (MQ=34)
                             tACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGc                                                                                                               >  1:116222/1‑121 (MQ=21)
                             tACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGc                                                                                                               <  2:116222/121‑1 (MQ=21)
                               cTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGAc                                                                                <  7:119159/149‑1 (MQ=21)
                                  gcggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑Ca                                                                                                <  7:96498/130‑1 (MQ=35)
                                  gcggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGAcc                                                                               <  5:19774/147‑1 (MQ=34)
                                  gcggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCta                                                                             >  8:348849/1‑148 (MQ=21)
                                  gcggcATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGACCTCC‑CAGGGTAATTCGCGCGACCtt                                                                             >  7:315088/1‑149 (MQ=21)
                                      cATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTg                                                                         >  5:14243/1‑149 (MQ=21)
                                       aTAACCTGTTCGGCCCTTGGTGGCGCGGTTATCCGCCACTTACTACTGCTTCGGCTGACTTCTGCACGCTCCTCCCGTCGCCTTTCGACGCGAGGTAGCACATTGGCATGCGTACAGATCTCC‑CAGGGTAATTCGCTCTACCTTCCTGc                                                                        <  4:222766/149‑1 (MQ=11)
                                       aTAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAgg                                                                                              <  2:9229/127‑1 (MQ=35)
                                       aTAACCTGTTCGGCCCTTGGTGGCGCAGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAgg                                                                                              >  1:9229/1‑127 (MQ=25)
                                        tAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCt                                                                       <  5:5940/149‑1 (MQ=34)
                                         aaCGTGTTGGGGCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCGCGTCGCCTTTCGACGCGCGGTAGCACAGTTGCAAGCGTACAGACCTCC‑CAGGGTAATTCGCGCGACCTTCCTGc                                                                        <  8:315088/147‑1 (MQ=11)
                                         aaCCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCtt                                                                      >  4:285053/1‑149 (MQ=21)
                                           ccTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTAt                                                                    <  2:53716/149‑1 (MQ=34)
                                           ccTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTAt                                                                    >  4:189916/1‑149 (MQ=34)
                                            cTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCt                                                                          <  4:64646/142‑1 (MQ=34)
                                            cTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTgagatcc                                                                   >  3:64646/1‑143 (MQ=21)
                                             tGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGc                                                                  >  3:344961/1‑149 (MQ=34)
                                               ttCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGc                                                                  <  5:94314/147‑1 (MQ=21)
                                               ttCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGc                                                                  <  4:264934/147‑1 (MQ=21)
                                               ttCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGc                                                                  <  6:188296/147‑1 (MQ=34)
                                                tCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTg                                                               >  3:256985/1‑149 (MQ=34)
                                                 cGGCCCTTTGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGt                                                              >  6:109014/1‑149 (MQ=21)
                                                  ggCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCtt                                                                      <  4:291787/140‑1 (MQ=34)
                                                  ggCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCtt                                                                      >  3:291787/1‑140 (MQ=34)
                                                  ggCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTc                                                             >  5:387156/1‑149 (MQ=34)
                                                     ccTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGa                                                          <  1:23912/149‑1 (MQ=21)
                                                     ccTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGa                                                          >  7:139671/1‑149 (MQ=21)
                                                     ccTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGa                                                          >  1:193391/1‑149 (MQ=34)
                                                      cTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGa                                                          >  7:125285/1‑148 (MQ=21)
                                                      cTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGAt                                                         >  1:205871/1‑149 (MQ=21)
                                                         tgtggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATc                                                        <  5:109014/146‑1 (MQ=21)
                                                         ggtggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CACGGTAATTCGCGAGACCTTCCTGCTTATGCCTGTCGGATCt                                                       >  7:175114/1‑148 (MQ=21)
                                                          gtggCGCGGTTAACCGCCACTTACTACGGCTTCGTCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTAc                                                     <  3:11981/149‑1 (MQ=21)
                                                          gtggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTAc                                                     <  2:205871/149‑1 (MQ=21)
                                                          gtggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTAc                                                     <  3:133643/149‑1 (MQ=34)
                                                           tggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACg                                                    <  3:98350/149‑1 (MQ=21)
                                                           tggCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGNAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACg                                                    <  3:103769/149‑1 (MQ=21)
                                                             gcgcGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGt                                                   <  7:107487/148‑1 (MQ=21)
                                                               gcgGTTAACCGCCACTTACTACGGCTTCGGGTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTca                                                 >  1:35561/1‑148 (MQ=21)
                                                                cgGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTcaca                                               <  8:361732/149‑1 (MQ=21)
                                                                cgGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTcaca                                               <  7:348849/149‑1 (MQ=34)
                                                                   ttAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGCTCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCg                                            >  6:78043/1‑149 (MQ=21)
                                                                     aaCCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGtt                                          >  6:330163/1‑149 (MQ=34)
                                                                        cGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCg                                       >  4:334441/1‑149 (MQ=21)
                                                                         gCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcgc                                                                                   >  4:372325/1‑104 (MQ=35)
                                                                         gCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTcgcgc                                                                                   <  3:372325/104‑1 (MQ=35)
                                                                           cACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTc                                                             <  1:56013/124‑1 (MQ=35)
                                                                           cACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTc                                                             >  2:56013/1‑124 (MQ=35)
                                                                              ttACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAg                                 >  7:11160/1‑149 (MQ=34)
                                                                                 ctacGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTAt                              <  6:387156/149‑1 (MQ=34)
                                                                                  tacGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTAtt                             >  7:61830/1‑149 (MQ=21)
                                                                                  tacGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAt                                                                                                       >  5:233022/1‑76 (MQ=39)
                                                                                  tacGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGAt                                                                                                       <  6:233022/76‑1 (MQ=39)
                                                                                  tacGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTAC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTCCAAGTAtt                             >  3:277685/1‑149 (MQ=21)
                                                                                    cGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTgg                           >  5:292661/1‑149 (MQ=21)
                                                                                    cGGCTTCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTg                            <  2:288743/148‑1 (MQ=21)
                                                                                        ttCGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCtt                       >  6:211676/1‑149 (MQ=21)
                                                                                        ttCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCtt                       >  2:63202/1‑149 (MQ=34)
                                                                                        ttCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGACTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTCTGCtt                       >  3:314613/1‑149 (MQ=255)
                                                                                          cGGCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGcgg                       <  6:14243/147‑3 (MQ=21)
                                                                                          cGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCttt                      <  4:256985/148‑1 (MQ=34)
                                                                                           ggCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTgg                    <  7:113997/149‑1 (MQ=21)
                                                                                           ggCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTg                     <  2:193391/148‑1 (MQ=34)
                                                                                            gCTGACTTCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGc                   >  1:247004/1‑149 (MQ=21)
                                                                                                 cTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGAttt              <  5:330163/149‑1 (MQ=34)
                                                                                                  ttCTGCACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTtg             >  4:95176/1‑149 (MQ=21)
                                                                                                  ttCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCgg                                                           >  2:371610/1‑103 (MQ=35)
                                                                                                  ttCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCgg                                                           <  1:371610/103‑1 (MQ=35)
                                                                                                  ttCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTtg             >  5:313433/1‑149 (MQ=34)
                                                                                                    cTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTtgt            <  8:11160/148‑1 (MQ=34)
                                                                                                      gCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGc          >  3:320872/1‑148 (MQ=34)
                                                                                                       cACGCTCGTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTTTGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCa        >  1:218432/1‑149 (MQ=21)
                                                                                                          gCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGCTCTCCGCAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCAcc      >  1:109883/1‑149 (MQ=255)
                                                                                                          gCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCt     >  2:251930/1‑149 (MQ=34)
                                                                                                          gCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCt     >  5:279569/1‑149 (MQ=34)
                                                                                                            tCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCa   >  7:246468/1‑149 (MQ=34)
                                                                                                              aTCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCAc  <  1:251930/148‑1 (MQ=34)
                                                                                                              |                                                                                                                                                    
ATTACGGTTACCAACGAGACGGCGACGCCTACTGGCGGCATAACCTGTTCGGCCCTTGGTGGCGCGGTTAACCGCCACTTACTACGGCTTCGGCTGACTTCTGCACGCTCATCCCGTCGCCTTTCGACGCGCGGTAGCACAGTGGCAAGCGTACAGATCTCC‑CAGGGTAATTCGCGCGACCTTCCTGCTTATGCCTGTCGGATCTACGTCACAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCAC  >  NC_002947/4348595‑4348852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑