| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 195,559 | 0 | C | A | 33.3% | 100.7 / 63.0 | 69 | T355T (ACC→ACA) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (22/24); new base A (13/10); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.73e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAC > NC_002947/195417‑195706 | cGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGt < 3:332931/149‑1 (MQ=32) aCGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAAt > 7:84904/1‑149 (MQ=40) ggCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATcc < 6:289720/149‑1 (MQ=255) gTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAAt < 2:77231/141‑1 (MQ=40) gTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAAt > 1:77231/1‑141 (MQ=40) catcaCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCg‑g > 5:350113/1‑149 (MQ=255) aCTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCa < 8:245074/149‑1 (MQ=39) cTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAg < 4:185225/149‑1 (MQ=38) ttGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGTAACTGACCCCGAATCCGACCCCG‑GCTCAGAc < 2:373226/148‑1 (MQ=37) aaGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCAc > 2:354557/1‑148 (MQ=37) aGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACg < 3:145956/148‑1 (MQ=37) aGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACg > 4:145956/1‑148 (MQ=37) gCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGAt < 5:374473/149‑1 (MQ=37) ccGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGAt > 4:203841/1‑148 (MQ=37) ccGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATc < 7:33708/149‑1 (MQ=37) ggCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGCCCCCGAATCCGCACCCG‑GCTCAGACCACGATC‑‑aa > 8:167239/1‑149 (MQ=255) gCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AAc < 4:204544/149‑1 (MQ=37) aaCCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAAAGTTTCGACCGTCAGCGATACCAACGAGAACGCAACCCGCGGTAATTTCGAGCAACTGAACCCGAATCCGACACCG‑TCTCAGACCCCGATC‑‑aagaacg > 7:183855/1‑144 (MQ=11) aGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTc < 6:350113/149‑1 (MQ=34) aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGAcc < 8:84904/149‑1 (MQ=39) cccGGCTAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGATAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGa < 7:127180/149‑1 (MQ=255) ccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGAc < 1:354557/149‑1 (MQ=39) cAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGa < 3:203841/149‑1 (MQ=38) aaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGc < 8:359361/146‑1 (MQ=17) aaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGc > 7:359361/1‑146 (MQ=17) aTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATCTTTGCGACTCGGTCGACACCACCACCGCGACCCAGACGGcca > 1:134471/1‑147 (MQ=11) aTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGc > 4:190253/1‑149 (MQ=37) cGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAACCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGt < 2:329086/149‑1 (MQ=12) gTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGATCCCGTc > 1:29317/1‑149 (MQ=12) acaacaacaGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGt > 2:162668/1‑148 (MQ=37) caacaaCGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCa > 3:138074/1‑149 (MQ=17) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg > 5:254913/1‑144 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCg < 6:254913/144‑1 (MQ=37) aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 2:351890/1‑149 (MQ=37) acaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCAcc > 5:188045/1‑149 (MQ=17) acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAAATGACACCGAATCCGACCCCG‑GCTCAGCCCACGATC‑‑AACGACTCGGTCCACACCACCACAGCGACCCTGACCGCGAGCCCGTCGGACACCGaa > 7:137468/1‑149 (MQ=11) gTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggc < 2:131360/149‑1 (MQ=17) ttCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcg > 2:128169/1‑149 (MQ=17) gACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc < 8:116593/148‑1 (MQ=17) agtgTCAGGGTCACAATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGATTCCGACCCCG‑GCTCAGACCAGTATC‑‑AACGAGTCGGTCGACACCACCACCGCGACCCTGACGGCGATGCTGTCGGTCACCGAAGGCGGCGt < 4:278775/146‑1 (MQ=11) aCCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt > 4:43942/1‑149 (MQ=37) aCCGTCAGCGTCACCATCAAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt > 8:9338/1‑149 (MQ=12) aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt < 3:302965/143‑1 (MQ=37) aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt > 4:302965/1‑143 (MQ=37) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑ACCGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACt > 5:276132/1‑149 (MQ=12) gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGACACCGAAGGCGGCGTGATCACt > 3:301351/1‑149 (MQ=12) gTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTa < 3:175884/149‑1 (MQ=17) tCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCAc > 2:137596/1‑127 (MQ=38) tCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTac > 7:17542/1‑149 (MQ=39) aCCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca < 3:190253/148‑1 (MQ=39) aCCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca < 1:351890/148‑1 (MQ=39) cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCg‑g > 2:192393/1‑56 (MQ=35) cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCg‑g < 1:192393/56‑1 (MQ=35) cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 2:63502/1‑149 (MQ=39) cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGGCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTc > 6:380641/1‑121 (MQ=38) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGAACTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACAcc > 1:110029/1‑149 (MQ=11) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 2:295450/1‑149 (MQ=17) cATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCg > 6:77587/1‑149 (MQ=17) aTCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGt < 1:128169/149‑1 (MQ=17) gagaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGa < 1:63502/148‑1 (MQ=39) agaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAct < 5:17691/149‑2 (MQ=39) agaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAcc < 3:43942/149‑1 (MQ=39) agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAcc > 2:62101/1‑149 (MQ=17) gaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAccc < 1:162668/149‑1 (MQ=39) aaCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCt > 1:231385/1‑149 (MQ=17) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 7:202521/149‑1 (MQ=17) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 7:35530/149‑1 (MQ=17) cGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACTACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGa < 2:110029/149‑1 (MQ=17) aCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCaa > 3:144778/1‑149 (MQ=39) ccGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc > 2:187646/1‑149 (MQ=39) | CGCCGGTGACCGTGACCCTGTCCAACGGCCAGGTCATCACTGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCG‑GCTCAGACCACGATC‑‑AACGACTCGGTCGACACCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAC > NC_002947/195417‑195706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |