| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,941,556:1 | +G | 5.6% | coding (788/912 nt) | PP_2574 → | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,941,556 | 1 | . | G | 5.6% | 294.6 / 9.2 | 72 | coding (788/912 nt) | PP_2574 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (38/30); new base G (2/2); total (40/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.90e-01 | |||||||||||
ATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAG > NC_002947/2941411‑2941702 | aTGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CAt > 1:132773/1‑149 (MQ=255) ggCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTg < 3:9387/148‑1 (MQ=255) cTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGcc > 2:83775/1‑147 (MQ=255) cTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGcc > 2:88215/1‑147 (MQ=255) gCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGcc < 3:39584/149‑1 (MQ=255) ccGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGt > 2:71811/1‑149 (MQ=255) cGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGcc < 8:117281/145‑1 (MQ=255) cGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGcc > 7:117281/1‑145 (MQ=255) cGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTg < 2:19512/149‑1 (MQ=255) gAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACGCCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTgg > 5:90969/1‑149 (MQ=255) aTCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCt > 2:172429/1‑149 (MQ=255) aTCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCt > 2:299348/1‑149 (MQ=255) aCCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGgctggctg > 6:292786/1‑149 (MQ=255) cGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACGCCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTgcg < 6:90969/149‑1 (MQ=255) gTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTgcgg > 1:207515/1‑149 (MQ=255) atcgaGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTg > 1:12729/1‑149 (MQ=255) aTGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGaa < 1:71811/149‑1 (MQ=255) gcgGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTc < 8:289573/149‑1 (MQ=255) gcgGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTc > 1:181972/1‑149 (MQ=255) cATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTg < 8:35241/106‑1 (MQ=255) cATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTg > 7:35241/1‑106 (MQ=255) ggtcAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCa > 6:231241/1‑148 (MQ=255) ggTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGgc > 6:304829/1‑149 (MQ=255) ggTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGgc > 7:255719/1‑149 (MQ=255) ggTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGgc > 8:48214/1‑149 (MQ=255) gTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAgttg > 5:134875/1‑149 (MQ=255) gTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTg > 4:189657/1‑148 (MQ=255) cTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAgtt > 1:318746/1‑137 (MQ=255) cTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAgtt < 2:318746/137‑1 (MQ=255) gTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGtttt < 6:315927/148‑1 (MQ=255) gTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTg < 7:48214/149‑1 (MQ=255) tAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGt < 6:134875/149‑1 (MQ=255) aCCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGtttt < 2:32663/145‑1 (MQ=255) aCCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGtttt > 1:32663/1‑145 (MQ=255) aCCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTc < 5:304829/148‑1 (MQ=255) cccGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGCCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCgg < 5:292786/149‑1 (MQ=255) gTCCGCACGCGGAATACACCTATGACGGCCAACGGCTGGCAATGCTCGA‑CATTGCCGAGCCGGGGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGaa < 4:186650/149‑1 (MQ=255) tCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCggg > 7:240386/1‑146 (MQ=255) cTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTgg < 1:172429/149‑1 (MQ=255) tCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGc > 6:85948/1‑149 (MQ=255) gAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCGGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGaa < 4:203401/149‑1 (MQ=255) cacCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTcc > 8:183555/1‑149 (MQ=255) acCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTTGCGAAGTTcc > 4:216320/1‑148 (MQ=255) acCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCt > 8:236567/1‑149 (MQ=255) ccTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTg < 5:85948/149‑1 (MQ=255) cTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGGCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGa < 8:132378/82‑1 (MQ=255) cTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGa > 7:132378/1‑82 (MQ=255) cTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTg > 7:102540/1‑148 (MQ=255) cTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTg > 7:168130/1‑148 (MQ=255) aTGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAg > 6:332805/1‑149 (MQ=255) tGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGaa < 2:12729/147‑1 (MQ=255) tGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGt < 8:240386/149‑1 (MQ=255) aCGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGa < 8:138661/112‑1 (MQ=255) aCGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGa > 7:138661/1‑112 (MQ=255) aCGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGa < 1:91389/149‑1 (MQ=255) cGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAg < 3:189657/149‑1 (MQ=255) gCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAg > 3:159514/1‑134 (MQ=255) gCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAg < 4:159514/134‑1 (MQ=255) ccAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCAc > 7:38818/1‑149 (MQ=255) tcggCAATG‑TCGAGCATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGa < 2:63036/99‑1 (MQ=255) tcggCAATG‑TCGAGCATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGa > 1:63036/3‑101 (MQ=255) tcggCAATG‑TCGAGCATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGaa > 4:290039/3‑134 (MQ=255) tcggCAATG‑TCGAGCATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGaa < 3:290039/132‑1 (MQ=255) cTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGaa < 5:231920/114‑1 (MQ=255) cTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGaa > 6:231920/1‑114 (MQ=255) cTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGc < 2:181972/149‑1 (MQ=255) gCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCgg > 1:281818/1‑149 (MQ=255) cTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCgg > 6:221130/1‑148 (MQ=255) tCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCgg > 6:173113/1‑147 (MQ=255) gA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAg > 4:314645/1‑148 (MQ=255) gA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAg < 1:83775/148‑1 (MQ=255) gA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAg < 1:88215/148‑1 (MQ=255) a‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCg > 2:309830/1‑143 (MQ=255) a‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCg < 1:309830/143‑1 (MQ=255) | ATGGGCCTGGCACCGAACATCGTCTTCAGTTCACCGTCGATCGAGATGGTGCGCGGCATGGTCGGTCAGGGTTTCGGTTTTTCGTTGCTGGTAACCCGTCCGCACTCGGAATACACCTATGACGGCCAACGCCTGGCAATGCTCGA‑CATTGCCGAGCCGGTGGCGCTGTCGGGGCTGGCTGCGGCGTGGTTGAAGCGAGTCCAGCTGACCAAACCGGCGCAGTTGTTCGTGGAGTTTTGTCGGGAAGAGCTGGCGAAGTTCCTGAAGTGAGCACGCCATGCCACCCCGGCAG > NC_002947/2941411‑2941702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |