New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 174906 | NA (NA) | 6 (0.120) | 5/254 | NT | NA | noncoding (1704/2902 nt) | PP_23SA | 23S ribosomal RNA |
? | NC_002947 | = 174936 | NA (NA) | noncoding (1734/2902 nt) | PP_23SA | 23S ribosomal RNA |
GCTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174754‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 GCTTCCAAGAAAAGCTCCTAAGCTTAAGATAACTGGGAACCGTACCCCAAACCGAAACAGGTGGTTTGGTAGAGAATACCAAGGCGCTTCAGAGAAATCGGTTC‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGC > 7:34954/1‑149 CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCC < 2:187468/149‑1 CTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCGTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCC > 3:176311/1‑149 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 1:220966/1‑149 TTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCG > 1:154593/1‑149 TCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGG > 2:249193/1‑149 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGCAAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCC < 1:75550/147‑1 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 3:140113/1‑149 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGG < 2:182055/148‑1 CCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTAGGTAGAAGGTGCGCCGGC > 3:47989/1‑149 CAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 1:264802/1‑148 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 3:11163/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 4:126654/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 2:116863/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 4:147173/1‑147 AAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC > 1:264038/1‑147 gcAAAGCTCCTAAGCTTCACATAAATTGGAACCTTACCCAAAACCGACACAGGTGGTTAGGTAGATAATACCAAGGCTCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGG < 8:151703/147‑1 GAAAAGCGCCTAAGCTTCAGATCACTGGGAACCTTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGG < 8:156061/149‑1 CTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAG > 2:295988/1‑149 ACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCG < 5:117623/149‑1 CCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGG < 1:295988/149‑1 CGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGC < 7:62310/149‑1 ACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGC < 2:18346/146‑1 ACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGC > 1:18346/1‑146 CCGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGG > 2:146882/1‑149 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGa > 8:34954/1‑148 CGGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGT < 2:5930/149‑1 GGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTT < 7:261433/149‑1 GGCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTT < 2:233953/149‑1 GCATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTC > 1:67872/1‑149 CATGGTCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCGTTGGTATTCTCTACCTAACCACCTGTGTGGGTTTGGGGTACGGTTCC < 6:42743/149‑1 CATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < 6:89299/149‑1 GCTTCCAAGAAAAGCTCCTAAGCTTCAGATAACTGGGAACCGTACCCCAAACCGACACAGGTGGTTAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTG‑AAGGAACTAGGCAAAATGGCACCGTAACTTCGGGAGAAGGTGCGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/174754‑174906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcATGGGCTTACGGAGCAAGTCCTTCACCCTCGCCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTAACCACCTGTGTCGGTTTGGGGTACGGTTCC < NC_002947/174936‑174789 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |