| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 213667 = | 56 (1.040) | 18 (0.340) | 6/256 | NT | 24.4% | coding (19173/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 217038 = | 57 (1.090) | coding (22544/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
TTCAACGGTAGCGATCGACATCACGACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGAGCAGTCACGGTGGCAGTACCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/213817‑213667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGA > NC_002947/217038‑217185 TTCAACGGTAGCGATCGACATCACGACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGAGCAGTCACGGTGGCAGTACCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGT > 1:72122/1‑149TTCAACGGTAGCGATCGACATCACGACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGAGCAGTCACGGTGGCAGTACCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGT > 5:82871/1‑149 AGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTCTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGCAGCAACGACCCTGTCGTGATGTCGATCGCTAC > 6:325206/1‑149 TACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCG > 8:102869/1‑149 CCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGT > 8:307081/1‑148 CCCACGGTGCCGTTGGCCGGCACAGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCCACCGTGACTGCTCCGGACAACGTCTACGTCGGCGCTAACGACCCTGTCGTGATGTCGATCGCAACCGTT > 7:283947/1‑149 CCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATC < 8:27458/139‑1 CCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATC > 7:27458/1‑139 CCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCCCTGCTACCGTCACTGCCCCGGACAACGTCTCCGTCGGCACCAACGACCCAGTCGTGATGTCGATCGCAACCGTTG > 8:230826/1‑149 CCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTT > 4:27129/1‑148 CCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTT > 6:113981/1‑148 CCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTT > 4:126819/1‑148 CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACCGTGACTGCTCAGGACAACGTCTACGTCGGTACCAACGACCCTGTCGTGATGTCGATCGCTACCGTTG > 5:79305/1‑148 CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGG > 4:57698/1‑149 GTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTAA‑ACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCCTGATGTCGATCGCAACCGTTGGAGGTGCG > 2:234608/1‑148 CGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGCCGGCCA‑ACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAAT > 7:171613/1‑119 CGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGCCGGCCA‑ACGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAAT < 8:171613/119‑1 GGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGCCGGCCACC‑GGCACCGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGGCCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGG > 5:210269/1‑149 CACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGTACTGCCACTGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAA < 3:27129/149‑1 CGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTG < 3:57698/148‑1 TGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACC < 1:132284/149‑1 GGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGA > 7:275908/1‑149 TTCAACGGTAGCGATCGACATCACGACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGAGCAGTCACGGTGGCAGTACCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCA‑A‑TGCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/213817‑213667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGGCGGCGCGGATGTTGGCAAGTTCGAACAGCTGACACTGGACAAGACCCCGGTCAGCACCGCCGTGACCGA > NC_002947/217038‑217185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |