New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 245107	53 (0.980)	4 (0.080)	4/250	NT	7.3%	coding (783/990 nt)	algP	transcriptional regulator AlgP
	?	NC_002947	= 245139	52 (1.020)					coding (815/990 nt)	algP	transcriptional regulator AlgP

GCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/244955‑245107 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggccGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCAGGTTTGGCTGCCGCAGCCGCCTTGGCAGCCGGTTTGGCCGCAGGCTTAGCGGCAGCGGTCGCCTTGGCAGCTGGTTTGGCCGCAGGCTTGGCGGCAGCGGTCGCCT  <  NC_002947/245139‑244995                                                                                                                                                                                                                                                                                                            GCGACCGCTGCCGCCCAGCCGGCCGCCAAACCGCCTGCCAATGCGACCGCTGCCGCCAAGCCTTCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGC                                                                                                                                                       <  1:73803/149‑1   GACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGG                                                                                                                                                     <  8:157459/149‑1             GCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCCGGCTTGG                                                                                                                                            >  4:305183/1‑148                                            CGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCCGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCA                                                                                                            <  3:305183/149‑1                                                   TGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCCGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCAG                                                                                                           >  5:100111/1‑143                                                   TGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCCGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCAG                                                                                                           <  6:100111/143‑1                                                                                                                                                      GGCCGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCAGGTTTGGCTGCCGCAGCCGCCTTGGCAGCCGGTTTGGCCGCAGGCTTAGCGGCAGCGGTCGCCTGGGCAGAGGGTTTTGCCGCAGGCTTGGCGGCAGCGGTCGCCT  >  7:121650/1‑149                                                                                                                                                                                                                                                                                                            GCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/244955‑245107 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggccGGCTTGGCAGCAGGGGCTTTGGCAGCTGGCTTGGCCGCAGGTTTGGCTGCCGCAGCCGCCTTGGCAGCCGGTTTGGCCGCAGGCTTAGCGGCAGCGGTCGCCTTGGCAGCTGGTTTGGCCGCAGGCTTGGCGGCAGCGGTCGCCT  <  NC_002947/245139‑244995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.