| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 452494 | 57 (1.060) | 3 (0.060) | 3/254 | NT | 5.2% | coding (412/1281 nt) | aruC | acetylornithine aminotransferase |
| ? | NC_002947 | = 452521 | 55 (1.060) | coding (439/1281 nt) | aruC | acetylornithine aminotransferase | |||||
AGGCTCAGGCGTTGATCAACCCGGGCTCGGGCTTCCACAACCGTGGCTTGCTGGGGCTGGTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/452345‑452494‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCTTGATCGCCCCTTCACAGGCCTCGGCACCGCTGTTAAGCAGGTAGGCCTGGTCACTGCCGGTACTCTGACACAGCCGGTTGACCAGCCCCAGCAAGCCACGGTTGTGGAAGC < NC_002947/452521‑452375 AGGCTCAGGCGTTGATCAACCCGGGCTCGGGCTTCCACAACCGTGGCTTGCTGGGGCTGGTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCG < 4:24905/149‑1AGGCTCAGGCGTTGATCAACCCGGGCTCGGGCTTCCACAACCGTGGCTTGCTGGGGCTGGTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCG < 4:81962/149‑1 cacCCGTGGCTTGCTGGGGCTGGTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCGCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCT < 2:62344/146‑1 GTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCGCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGC < 5:305525/126‑1 GTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCGCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGC > 6:305525/1‑126 GGCGCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCTTGATCGCCCCTTCACAGGCCTCGGCACCGCTGTTAAGCAGGTAGGCCTGGTCACTGCCGGTACTCTGACACAGCCGGTTGACCAGCCCCAGCAAGCCACGGTTGTGG < 6:17301/148‑1 GCGCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCTTGATCGCCCCTTCACAGGCCTCGGCACCGCTGTTAAGCAGGTAGGCCTGGTCACTGCCGGTACTCTGACACAGCCGGTTGACCAGCCCCAGCAAGCCACGGTTGTGG > 2:270099/1‑147 GCCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCTTGATCGCCCCTTCACAGGCCTCGGCACCGCTGTTAAGCAGGTAGGCCTGGTCACTGCCGGTACTCTGACACAGCCGGTTGACCAGCCCCAGCAAGCCACGGTTGTGGAAGC > 1:91624/1‑149 AGGCTCAGGCGTTGATCAACCCGGGCTCGGGCTTCCACAACCGTGGCTTGCTGGGGCTGGTCAACCGGCTGTGTCAGAGTACCGGCAGTGACCAGGCCTACCTGCTTAACAGCGGTGCCGAGGCCTGTGAAGGGGCGATCAAGCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/452345‑452494‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcCGTTGCGGTGCAGTTGGCCCCACTTACGCGCCAGCTTGATCGCCCCTTCACAGGCCTCGGCACCGCTGTTAAGCAGGTAGGCCTGGTCACTGCCGGTACTCTGACACAGCCGGTTGACCAGCCCCAGCAAGCCACGGTTGTGGAAGC < NC_002947/452521‑452375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |