| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 774001 | 48 (0.890) | 4 (0.080) | 4/252 | NT | 7.9% | coding (608/1419 nt) | PP_0665 | glyceraldehyde‑3‑phosphate dehydrogenase |
| ? | NC_002947 | = 774029 | 48 (0.930) | coding (636/1419 nt) | PP_0665 | glyceraldehyde‑3‑phosphate dehydrogenase | |||||
CTCAACCTGGTGGCGCACAAGCTGGGGCCAGCACTTGCAGGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/773850‑774001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccacCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACGGTGACGACGGCCTCCGGCAGCCCTGCATCCACCAGGTACTGCACCAGTTTCAGGGCAGAAAGCGGGGCCAGTTCCGAGGGTTTCAGAATGACCGCATTGCCCCCTGCAAGT < NC_002947/774029‑773882 CTCAACCTGGTGGCGCACAAGCTGGGGCCAGCACTTGCAGGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGC < 2:30834/149‑1CTCAACCTGGTGGCGCACAAGCTGGGGCCAGCACTTGCAGGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGC > 7:288203/1‑149 AACCTGGTGGCGCACAAGCTGGGGCCAGCACTTGCAGGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCA > 1:85889/1‑148 GGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTAC < 7:149907/149‑1 GGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACG < 2:130262/149‑1 TGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCT > 5:69229/1‑89 TGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCT < 6:69229/89‑1 AGCCACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACGGTGACGACGGCCTCCGGCAGCCCTGCATCCACCAGGTACTGCACCAGTTTCAGGGCAGAAAGCGGGGCCAGTTCCGAGGGTTTCAGAATGACCGCATTGCCCCCTG > 6:91960/1‑149 CACCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACGGTGACGACGGCCTCCGGCAGCCCTGCATCCACCAGGTACTGCACCAGTTTCAGGGCAGAAAGCGGGGCCAGTTCCGAGGGTTTCAGAATGACCGCATTGCCCCCTGCAA < 3:23824/149‑1 CCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACGGTGACGACGGCCTCCGGCAGCCCTGCATCCACCAGGTACTGCACCAGTTTCAGGGCAGAAAGCGGGGCCAGTTCCGAGGGTTTCAGAATGACCGCATTGCCCCCTGCAAGT > 4:262001/1‑149 CTCAACCTGGTGGCGCACAAGCTGGGGCCAGCACTTGCAGGGGGCAATGCGGTCATTCTGAAACCCTCGGAACTGGCCCCGCTTTCTGCCCTGAAACTGGTGCAGTACCTGGTGGATGCAGGGCTGCCGGAGGCCGTCGTCACCGTAGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/773850‑774001‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccacCAGCGCCTTGCCCAGTTCGGCGCCCCCTGTGGCTACGGTGACGACGGCCTCCGGCAGCCCTGCATCCACCAGGTACTGCACCAGTTTCAGGGCAGAAAGCGGGGCCAGTTCCGAGGGTTTCAGAATGACCGCATTGCCCCCTGCAAGT < NC_002947/774029‑773882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |