New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 144514452 (0.970)3 (0.060) 3/254 NT 5.5% coding (768/1530 nt) PP_1263 fusaric acid resistance protein
?NC_002947 = 1445188 54 (1.040)coding (812/1530 nt) PP_1263 fusaric acid resistance protein

TGGAACAGCAGGAGCAGATCCTGGCCCTGGCCAAGCGTCGCCTGGATGCCGGTATCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1444993‑1445144
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGGGTCAGGGCAATTTCTTCGTCGAGGCTGTCGAGCTGACGGTGGGTTTCCGGCAGCGGCGCTTCGGCCTGGCTGACTTCGAAATGGGTGCCGATACCG  <  NC_002947/1445188‑1445042
                                                                                                                                                                                                                                                                                                           
TGGAACAGCAGGAGCAGATCCTGGCCCTGGCCAAGCGTCGCCTGGATGCCGGTATCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGACAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCG                                                                                                                                                         >  3:229855/1‑148
  GAACAGCAGGAGCAGATCCTGGCCCTGGCCAAGCGTCGCCTGGATGCCGGTATCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAA                                                                                                                                                      >  1:107301/1‑149
  GAACAGCAGGAGCAGATCCTGGCCCTGGCCAAGCGTCGCCTGGATGCCGGTATCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAA                                                                                                                                                      >  1:53975/1‑149
                                                      TCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAACTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCTAGCTGGTTGCG                                                                                                   <  5:168909/148‑1
                                                                     AAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAACTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGG                                                                                                  >  7:76163/1‑134
                                                                     AAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAACTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGG                                                                                                  <  8:76163/134‑1
                                                                                                                                                    CAACTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGGGTCAGGGCAATTTCTTCGTCGAGGCTGTCGAGCTGACGGTGGGTTTCCGGCAGCGGCGCTTCGGCCTGGCTGACTTCGAAATGGGTGCCGATAC    <  7:296568/149‑1
                                                                                                                                                      ACTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGGGTCAGGGCAATTTCTTCGTCGAGGCTGTCGAGCTGACGGTGGGTTTCCGGCAGCGGCGCTTCGGCCTGGCTGACTTCGAAATGGGTGCCGATACCG  >  1:86330/1‑149
                                                                                                                                                                                                                                                                                                           
TGGAACAGCAGGAGCAGATCCTGGCCCTGGCCAAGCGTCGCCTGGATGCCGGTATCGGCACCCATTTCGAAGTCAGCCAGGCCGAAGCGCCGCTGCCGGAAACCCACCGTCAGCTCGACAGCCTCGACGAAGAAATTGCCCTGACCCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1444993‑1445144
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaacTGCGCGCCTTCCCCCGGGCCCTTGCCGGCCAGTGCGGCCAGCTGGTTGCGGGTCAGGGCAATTTCTTCGTCGAGGCTGTCGAGCTGACGGTGGGTTTCCGGCAGCGGCGCTTCGGCCTGGCTGACTTCGAAATGGGTGCCGATACCG  <  NC_002947/1445188‑1445042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.