| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1486101 = | 57 (1.060) | 3 (0.060) | 3/256 | NT | 5.2% | coding (990/1098 nt) | yhdY | amino acid ABC transporter permease |
| ? | NC_002947 | 1486132 = | 54 (1.030) | coding (1021/1098 nt) | yhdY | amino acid ABC transporter permease | |||||
GGGCCAGCAGGCTGCTTGATCGCTTCACTCATTTCGAAACTCCTAACGCTTGTGGCCAGTGTCCAGCTTGCGCTCCAGATGCATGGAGTAGCGGGACATACCGAAACAGAAAATCCAGAACACCAGGGCGGCGAACACGTAGCCCTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1486251‑1486101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAGGAGTTTCGAAATGAGTGAAGCGATCAAGCAGCCTGCTGGCCCCGAAGGCATCATCCAGATGCAGGGTGT > NC_002947/1486132‑1486278 GGGCCAGCAGGCTGCTTGATCGCTTCACTCATTTCGAAACTCCTAACGCTTGTGGCCAGTGTCCAGCTTGCGCTCCAGATGCATGGAGTAGCGGGACATACCGAAACAGAAAATCCAGAACACCAGGGCGGCGAACACGTAGCCCTCGG < 1:23084/149‑1 CAGAACACCAGGGCGGCGAACACGTAGCCCTCGGTGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAGGAGTTT > 5:242791/1‑120 CAGAACACCAGGGCGGCGAACACGTAGCCCTCGGTGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAGGAGTTT < 6:242791/120‑1 CACCAGGGCGGCGAACACGTAGCCCTCGGTGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCAT < 4:201334/73‑1 TGTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAGGAGTTTCGAAATGAGTGAAGCGATCAAGCAGCCTGCTGGCCCCGAAGGCATCATCCAGATGCAGGGTGT < 7:174312/149‑1 GGGCCAGCAGGCTGCTTGATCGCTTCACTCATTTCGAAACTCCTAACGCTTGTGGCCAGTGTCCAGCTTGCGCTCCAGATGCATGGAGTAGCGGGACATACCGAAACAGAAAATCCAGAACACCAGGGCGGCGAACACGTAGCCCTCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1486251‑1486101‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgTTCTGGATTTTCTGTTTCGGTATGTCCCGCTACTCCATGCATCTGGAGCGCAAGCTGGACACTGGCCACAAGCGTTAGGAGTTTCGAAATGAGTGAAGCGATCAAGCAGCCTGCTGGCCCCGAAGGCATCATCCAGATGCAGGGTGT > NC_002947/1486132‑1486278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |