| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1682236 | 58 (1.080) | 4 (0.080) | 3/250 | NT | 6.5% | coding (755/1710 nt) | recJ | ssDNA‑specific exonuclease RecJ |
| ? | NC_002947 | = 1682287 | 61 (1.200) | coding (806/1710 nt) | recJ | ssDNA‑specific exonuclease RecJ | |||||
GCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1682083‑1682236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGA < NC_002947/1682287‑1682140 GCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGC < 3:107864/149‑1GCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGC > 3:287538/1‑149GCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGC > 7:257251/1‑149 GCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCG < 2:211213/149‑1 CGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGTGATCGCGCCGCGCCACCTCAAGGATGGCCTT > 4:212534/1‑147 TGGTGGCGCTGGGCAGTGTGGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCGGGTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGC < 5:38711/149‑1 GTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGC < 3:212534/147‑1 GGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGGTGATAGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGAT < 4:287538/149‑1 GCCGGTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCAC > 8:61237/1‑145 GGTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATC > 4:74769/1‑148 GTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGA < 1:228546/149‑1 GCTTGCGCAGCCTTGGGCGCTACGAGGCGCAGCCACAGCCGAACATTGGCGAACTGCTCGATCTGGTGGCGCTGGGCAGTGTTGCTGACGTGGTGCCGCTGGATGCCAACAACCGCATCCTGGTGCACCAAGGCCTTGAGCGCATCCGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1682083‑1682236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccggTGATCGCGCCGCGCCACCTCAAGGATGGCCTTGAGGCCGGGCCGGGCGCGGCCGGCGCGGATGCGCTCAAGGCCTTGGTGCACCAGGATGCGGTTGTTGGCATCCAGCGGCACCACGTCAGCAACACTGCCCAGCGCCACCAGATCGA < NC_002947/1682287‑1682140 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |