New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1790378	46 (0.850)	4 (0.080)	4/254	NT	7.3%	coding (308/1215 nt)	dxr	1‑deoxy‑D‑xylulose‑5‑phosphate reductoisomerase
	?	NC_002947	= 1790436	57 (1.100)					coding (366/1215 nt)	dxr	1‑deoxy‑D‑xylulose‑5‑phosphate reductoisomerase

GCTGTTGGCGCTATGCGTGCGTCATCGTCCGGCCTTCGCTGTGGTGCCGAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1790226‑1790378 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGCCGACGCCACTTGGCAAAGCCCGGCCTCACCTTCCAGCACCTCGGTGGTGCAACCGGCCGCAGCCAGACTCGCACGCAACCTCACC  <  NC_002947/1790436‑1790289                                                                                                                                                                                                                                                                                                               GCTGTTGGCGCTATGCGTGCGTCATCGTCCGGCCTTCGCTGTGGTGCCGAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGG                                                                                                                                                          <  1:318461/149‑1     TTGGCGCTATGCGTGCGTCATCGTCCGGCCTTCGCTGTGGTGCCGAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGC                                                                                                                                                      <  3:185185/149‑1                            TCCGGCCTTCGCTGTGGTGCCGAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGCCAGCGTGGGGCGCAGGCCGGCAG                                                                                                                               >  7:295838/1‑149                                                 GAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGCCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCA                                                                                                          >  3:99793/1‑149                                                                    AGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGCCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGC                                                                                       <  4:99793/149‑1                                                                    AGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGCCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGG                                                                                        <  8:295838/148‑1                                                                                                                                                        GCCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGCCGACGCCACTTGGCAAAGCCCGGCCTCACCTTCCAGCACCTCGGTGGTGCAACCGGCCGCAGCCAGACTCGCACGCAACCTCAC   <  4:45535/149‑1                                                                                                                                                        GCCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGCCGACGCCACTTGGCAAAGCCCGGCCTCACCTTCCAGCACCTCGGTGGTGCAACCGGCCGCAGCCAGACTCGCACGCAACCTCAC   >  7:20288/1‑149                                                                                                                                                         CCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGCCGACGCCACTTGGCAAAGCCCGGCCTCACCTTCCAGCACCTCGGTGGTGCAACCGGCCGCAGCCAGACTCGCACGCAACCTCACC  <  2:202732/149‑1                                                                                                                                                                                                                                                                                                               GCTGTTGGCGCTATGCGTGCGTCATCGTCCGGCCTTCGCTGTGGTGCCGAGCACCGAGGCGGCGGTGAGGTTGCGTGCGAGTCTGGCTGCGGCCGGTTGCACCACCGAGGTGCTGGAAGGTGAGGCCGGGCTTTGCCAAGTGGCGTCGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1790226‑1790378 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCAGCGTGGGGCGCAGGCCGGCAGCACCGACAATGGCTGCCATCACTGCATCCACTTCAGCGGCCGACGCCACTTGGCAAAGCCCGGCCTCACCTTCCAGCACCTCGGTGGTGCAACCGGCCGCAGCCAGACTCGCACGCAACCTCACC  <  NC_002947/1790436‑1790289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.