New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1855443	50 (0.930)	3 (0.060)	3/240	NT	5.3%	coding (455/1341 nt)	PP_1659	hypothetical protein
	?	NC_002947	= 1855472	62 (1.270)					coding (484/1341 nt)	PP_1659	hypothetical protein

CCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1855287‑1855443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggttgaccaTGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGGGCACGG  <  NC_002947/1855472‑1855326                                                                                                                                                                                                                                                                                                                  CCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTG                                                                                                                                                             >  7:149460/1‑149    AGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTT                                                                                                                                                          <  8:20834/149‑1       GTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGTCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGAC                                                                                                                                                       <  8:127922/149‑1        TCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCCGCCGTTCAAGACCGGCCCGCTGGTTGAC                                                                                                                                                       >  1:326453/1‑148                                                  GGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGCTGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGC                                                                                                            <  5:47867/149‑1                                                                                                                            TCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGG                                                                                                                     <  3:247731/66‑1                                                                                                                            TCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCATGATCGCGTTGAGCGTGTAAGTGCCGCTTTGG                                                                                                                     >  4:247731/1‑66                                                                                                                                                      GTTGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGG        >  7:179557/1‑149                                                                                                                                                        TGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGC                       <  3:202698/132‑1                                                                                                                                                        TGACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGC                       >  4:202698/1‑132                                                                                                                                                         GACCATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGGGCA     >  3:248616/1‑149                                                                                                                                                            CATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGGGCACGG  >  1:22301/1‑149                                                                                                                                                            CATGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGGGCACGG  >  4:287480/1‑149                                                                                                                                                                                                                                                                                                                  CCAAGGGTCAGAAACCCGTCGCCTGGGACCAGCAGGCGCCCGTGCCCGCGGCCTGCCAAGGCAAGGGTGACTTGCCGGTGCTGCAACAGATGGGCAAGGTCGCCGGTGTGCTCGATGAGTTCATCCAGCCGTTCAAGACCGGCCCGCTGGTTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1855287‑1855443 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggttgaccaTGATCGCGTTGCGCGTGTAAGTGCCGCTTTGGTCAACCAGCGGGCCGGTCTTGAACGGCTGGATGAACTCATCGAGCACACCGGCGACCTTGCCCATCTGTTGCAGCACCGGCAAGTCACCCTTGCCTTGGCAGGCCGCGGGCACGG  <  NC_002947/1855472‑1855326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.