New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1952705	47 (0.870)	3 (0.060)	3/256	NT	5.4%	coding (836/1965 nt)	mnmC	methyltransferase/FAD‑dependent oxidoreductase
	?	NC_002947	= 1952730	59 (1.130)					coding (811/1965 nt)	mnmC	methyltransferase/FAD‑dependent oxidoreductase

CACCCCTTGTGGGTTGCCCGAAGCCTCCTGGGCGGGGGCTTCGTGGCGCTCCAGCACGGTTACCTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1952635‑1952705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcAGCGCC‑‑GCCAGCCTGGCCCGGCGCGGCTGGCAGGTAACCGTGCTGGAGCGCCACGAAGCCCCCGCCCAGGAGGCTTCGGGCAACCCACAAGGGGTGCTGTACCTCAAGCTGTCTGCCCATGGCACCGCGCTGTCGCAGATGATCCT  <  NC_002947/1952730‑1952585                                                                                                                                                                                                                             CACCCCTTGTGGGTTGCCCGAAGCCTCCTGGGCGGGGGCTTCGTGGCGCTCCAGCACGGTTACCTGCCAGCAGCGCC‑‑GCCAGCCTGGCCCGGCGCGACTGGCA                                                                                                                    <  5:333051/103‑1 CACCCCTTGTGGGTTGCCCGAAGCCTCCTGGGCGGGGGCTTCGTGGCGCTCCAGCACGGTTACCTGCCAGCAGCGCC‑‑GCCAGCCTGGCCCGGCGCGACTGGCA                                                                                                                    >  6:333051/1‑103                                                           GTTACCTGCCAGCCGCGCCGGGCCAGGCTGG‑‑CGGCGCTGCTGGCAGGTAACCGTGCTGGAGCGCCACGAAGCCCCCGCCCAGGAGGCTTCGGGCAACCCACAAGGGGTGCTGTACCTCAAGCTGTCTGCCCATGGCACCGCGCTGTCG             >  4:12187/1‑148                                                                     AGCAGCGCC‑‑GCCAGCCTGGCCCGGCGCGGCTGGCAGGTAACCGTGCTGGAGCGCCACGAAGCCCCCGCCCAGGAGGCTTCGGGCAACCCACAAGGGGTGCTGTACCTCAAGCTGTCTGCCCATGGCACCGCGCTGTCGCAGATGATCCT  >  2:181000/1‑149                                                                                                                                                                                                                             CACCCCTTGTGGGTTGCCCGAAGCCTCCTGGGCGGGGGCTTCGTGGCGCTCCAGCACGGTTACCTGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1952635‑1952705 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcAGCGCC‑‑GCCAGCCTGGCCCGGCGCGGCTGGCAGGTAACCGTGCTGGAGCGCCACGAAGCCCCCGCCCAGGAGGCTTCGGGCAACCCACAAGGGGTGCTGTACCTCAAGCTGTCTGCCCATGGCACCGCGCTGTCGCAGATGATCCT  <  NC_002947/1952730‑1952585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.