| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2447783 = | 49 (0.910) | 3 (0.060) | 3/242 | NT | 6.1% | coding (3300/3318 nt) | PP_2146 | SNF2/RAD54 family helicase |
| ? | NC_002947 | 2447837 = | 47 (0.950) | coding (3246/3318 nt) | PP_2146 | SNF2/RAD54 family helicase | |||||
TTCGTGTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2447941‑2447783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccattgcccAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > NC_002947/2447837‑2447983 TTCGTGTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGC < 3:145440/149‑1TTCGTGTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGC > 4:258054/1‑149 CGTGTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCG < 6:320061/148‑1 GTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCAT > 8:20247/1‑149 TTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATT > 5:134058/1‑149 TTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATT > 6:39150/1‑149 AGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCTCTCCATTGCCC > 5:102371/1‑149 AGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATTGCCC > 5:107158/1‑149 CAATGGCGGCGTGGCGATGAAGAAATCGAGGCGCTGTTAGCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTACCTGCTGCAACAACTGGATCTACTCTTCCACCGTACCCCGGGTAATAAGCTTG > 5:260521/1‑148 ATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATC > 7:147719/1‑113 ATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATC < 8:147719/113‑1 GCGCCATTGCCCAGCCTGCCGGCGGGCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGCTCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCAC < 6:260521/149‑1 CGCCATTGCCCAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCAC < 7:228545/148‑1 CCAGCCTGCTGGACGGCGGGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > 3:84175/1‑149 TTCGTGTTCAAGCTGATTACCCGGGGTACGGTGGAAGAGAAGATCCAGTTGTTGCAGCAGGAAAAGGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTGGGCAATGGCGGCTTGGCGATGAAGAAATCGAGGCCCTGTTCGCGCCATTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2447941‑2447783‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccattgcccAGCCTGCCCGCCGTCCAGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > NC_002947/2447837‑2447983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |