| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2575626 = | 53 (0.980) | 5 (0.100) | 5/252 | NT | 9.2% | coding (803/1689 nt) | PP_2258 | sensory box protein |
| ? | NC_002947 | 2575674 = | 48 (0.930) | coding (851/1689 nt) | PP_2258 | sensory box protein | |||||
TAAAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2575779‑2575626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACTGGG > NC_002947/2575674‑2575821 TAAAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTG > 1:242160/1‑149TAAAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTG < 2:242160/149‑1TAAAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCGGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTG > 6:205613/1‑149 AAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGC > 4:300166/1‑149 AAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGG < 4:219144/148‑1 ACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGC > 7:258134/1‑149 GTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCTCCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGT > 5:34799/1‑149 TTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTG > 5:275307/1‑149 CCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTA < 8:258134/149‑1 CGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTAC < 6:275307/149‑1 GGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTA < 2:213543/149‑1 CGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACT < 8:245744/149‑1 CAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACTGG < 3:315855/149‑1 AACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCCCGGCCACCCACCAGACCGTGGCTCGCGTGCGCCGGGCGCTGCTCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACTGGG > 5:237268/1‑149 AACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACTGGG > 7:220350/1‑149 TAAAGGCACAGCTCACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2575779‑2575626‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcaACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTGGCGCGCGTGCGCCGGGCGCTGCGCAACGGTGAGCTGTGCCTTTACTACCAGCCCAAGGTCAACCTGCGCACTGGCAAGGTACTGGG > NC_002947/2575674‑2575821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |