| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2827444 = | 57 (1.060) | 4 (0.080) | 4/256 | NT | 6.8% | coding (857/1224 nt) | PP_2479 | cytochrome c family protein |
| ? | NC_002947 | 2827489 = | 55 (1.050) | coding (902/1224 nt) | PP_2479 | cytochrome c family protein | |||||
ACCGTCTTCAAGCCCAGCAGCATGGCCGTCTGGCTCTGGTTGCCCGTGCCGTCCCAGCGGTGGCAACTGGCGCAGGCTTCGGCGAACAGCTTGTTGCCGAGTGCACTGCCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2827594‑2827444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGACGGTCAACGATCCGGCCGCCAGCAACTTGCTCGGCATTCTGTT > NC_002947/2827489‑2827633 ACCGTCTTCAAGCCCAGCAGCATGGCCGTCTGGCTCTGGTTGCCCGTGCCGTCCCAGCGGTGGCAACTGGCGCAGGCTTCGGCGAACAGCTTGTTGCCGAGTGCACTGCCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGG < 7:294805/149‑1 CGTCTTCAAGCCCAGCAGCATGGCCGTCTGGCTCTGGTTGCCCGTGCCGTCCCAGCGGTGGCAACTGGCGCAGGCTTCGGCGAACAGCTTGTTGCCGAGTGCACTGCCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCA > 3:134645/1‑149 ACTGCCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCAGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGA > 1:310982/1‑149 CCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCAGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGACGGT > 5:300451/1‑149 CCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCAGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGCGCTTGAAGACGG < 2:310982/148‑1 GTGACCTGCTGCGGGCGAGGCAGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGACGGTCAACGATCCGGCCGCCAGCAA < 6:300451/149‑1 GGCAGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGACGGTCAACGATCCGGCCGCCAGCAACTTGCTCGGCATTCTGTT < 8:95458/149‑1 ACCGTCTTCAAGCCCAGCAGCATGGCCGTCTGGCTCTGGTTGCCCGTGCCGTCCCAGCGGTGGCAACTGGCGCAGGCTTCGGCGAACAGCTTGTTGCCGAGTGCACTGCCGCTGCCCGGTTCTGCAAGCGTGACCTGCTGCGGGCGAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2827594‑2827444‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaGTGCACTCGGCAACAAGCTGTTCGCCGAAGCCTGCGCCAGTTGCCACCGCTGGGACGGCACGGGCAACCAGAGCCAGACGGCCATGCTGCTGGGCTTGAAGACGGTCAACGATCCGGCCGCCAGCAACTTGCTCGGCATTCTGTT > NC_002947/2827489‑2827633 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |