| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2878744 = | 66 (1.230) | 6 (0.120) | 6/250 | NT | 9.7% | coding (262/996 nt) | PP_2533 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | 2878785 = | 49 (0.960) | coding (221/996 nt) | PP_2533 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
GAACAACTTGCCGCAAGTTTTGCCGATGCCGATGCCCTGGTACTCACCCGCGAACGCACACGCATCGACGCCGCCTTGCTCGACCGCCTGCCCAACCTCAAGCTGATCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2878891‑2878744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctgATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTGGCAGGCGGGAGCTCATGAAGGACGCTGACAGC > NC_002947/2878785‑2878930 GAACAACTTGCCGCAAGTTTTGCCGATGCCGATGCGCTGGTACTCACCCGCGAACGCACACGCATCGACGCCGCCTTGCTCGACCGCCTGCCCATCCTCAAGCTGATCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCT < 2:46593/147‑1 GCTGATCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGT > 5:344559/1‑149 TGATCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCGAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTG > 3:309882/1‑149 TCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGGGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTC > 1:274076/1‑149 CAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTGATCATGCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTC > 1:241452/1‑149 GACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTG < 6:344559/149‑1 TGTCCAGCCACCTTGACCTGGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTGGCAGGCGGGAG < 2:241452/149‑1 GGCTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTGGCAGGCGGGAGCTCATGAAGGACGCTGA > 2:38202/1‑147 CTGATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTGGCAGGCGGGAGCTCATGAAGGACGCTGACAGC < 1:170016/149‑1 GAACAACTTGCCGCAAGTTTTGCCGATGCCGATGCCCTGGTACTCACCCGCGAACGCACACGCATCGACGCCGCCTTGCTCGACCGCCTGCCCAACCTCAAGCTGATCAGCCAGACCGGCAAGGTGTCCAGCCACCTTGACCTGGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2878891‑2878744‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctgATCA‑GCTTGAGGTTGGGCAGGCGGTCGAGCAAGGCGGCGTCGATGCGTGTGCGTTCGCGGGTGAGTACCAGGGCATCGGCATCGGCAAAACTTGCGGCAAGTTGTTCCAGCGTGGCAGGCGGGAGCTCATGAAGGACGCTGACAGC > NC_002947/2878785‑2878930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |