New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2988909 =	49 (0.910)	5 (0.100)	3/254	NT	8.8%	coding (433/951 nt)	PP_2613	hypothetical protein
	?	NC_002947	2988975 =	56 (1.080)					coding (367/951 nt)	PP_2613	hypothetical protein

CAGACGCTCACGAGCTGCTTGCCCATGCAATCACGACCTGGATGCCTATCGGTGGAGCCATCGCGCTGGATGCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2989058‑2988909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccaGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTG  >  NC_002947/2988975‑2989058                                                                                                                                                                                                                                            CAGACGCTCACGAGCTGCTTGCCCATGCAATCACGACCTGGATGCCTATCGGTGGAGCCATCGCGCTGGATGCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCC                                                                                       <  5:181715/149‑1                                                                                     TGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGG                        >  5:81907/1‑128                                                                                     TGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGG                        <  6:81907/128‑1                                                                                     TGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGG                        >  7:1476/1‑128                                                                                     TGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGG                        <  8:1476/128‑1                                                                                      GGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCAGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGTATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTG  >  2:253607/1‑149                                                                                                                                                                                                                                            CAGACGCTCACGAGCTGCTTGCCCATGCAATCACGACCTGGATGCCTATCGGTGGAGCCATCGCGCTGGATGCCGAGGTTGGCCTGGCAGCGCTGGCAGACCACTTCACCAGCCTGGTGCAGGTCGTGCTCCCTGACCACAGCGTTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2989058‑2988909 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccaGGCCAACCTCGGCATCCAGCGCGATGGCTCCACCGATAGGCATCCAGGTCGTGATTGCATGGGCAAGCAGCTCGTGAGCGTCTG  >  NC_002947/2988975‑2989058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.