| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3120002 = | 52 (0.970) | 4 (0.080) | 4/252 | NT | 7.9% | coding (683/1248 nt) | PP_2736 | hypothetical protein |
| ? | NC_002947 | 3120062 = | 43 (0.840) | coding (623/1248 nt) | PP_2736 | hypothetical protein | |||||
TGCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3120152‑3120002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcctTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACCAGATCGCCGACCCCATCGGTACGATGTAATGATCGA > NC_002947/3120062‑3120209 TGCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGC > 2:277887/1‑149TGCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGC < 2:57042/149‑1 GCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCC > 2:176713/1‑149 GCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCC > 6:179759/1‑149 CTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT > 1:43099/1‑149 CTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT < 2:43099/149‑1 TCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCAGTTCGCTGAGCGCAACCGCCa > 5:137791/1‑147 CCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT > 3:308660/1‑114 CCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT < 4:308660/114‑1 GTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGG > 5:156233/1‑148 TCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGT > 8:96453/1‑149 GCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCTTTGACCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGC < 6:156233/149‑1 CCGGCCGTTCGCTGAGCGCATCCGCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACCAGATCGCCGA < 7:96453/149‑1 CCGCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACC < 4:52546/118‑1 CCGCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACC > 3:52546/1‑118 GCCTTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACCAGATCGCCGACCCCATCGGTACGATGTAATGAT < 8:86999/149‑1 TTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACCAGATCGCCGACCCCATCGGTACGATGTAATGATCGA > 2:16419/1‑149 TGCTCCACTTCCCGCTTGAGTTCTTCGTGCGCTTCTGCCGCAACCACGGCTTGCTGTCGGTCAACCAACGTCCACAGTGGCGGGTGATCAAAGGCGGCTCGCGCAGCTATGTCGCACCGCTGTGCCGGCCGTTCGCTGAGCGCATCCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3120152‑3120002‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcctTTGATCACCCGCCACTGTGGACGTTGGTTGACCGACAGCAAGCCGTGGTTGCGGCAGAAGCGCACGAAGAACTCAAGCGGGAAGTGGAGCATGTCTGCGCGAGACATCGACCAGATCGCCGACCCCATCGGTACGATGTAATGATCGA > NC_002947/3120062‑3120209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |