New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3146850 =	54 (1.000)	4 (0.080)	4/252	NT	7.3%	coding (1019/1239 nt)	sfnA	acyl‑CoA dehydrogenase/oxidase family protein
	?	NC_002947	3146888 =	50 (0.970)					coding (981/1239 nt)	sfnA	acyl‑CoA dehydrogenase/oxidase family protein

CCTCCGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3147003‑3146850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGCAATACCTGT  >  NC_002947/3146888‑3147029                                                                                                                                                                                                                                                                                                          CCTCCGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTG                                                                                                                                                     <  8:267096/149‑1  CTCCGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGG                                                                                                                                                    >  1:153904/1‑149  CTCCGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGG                                                                                                                                                    <  3:18724/149‑1     CGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGG                                                                                                                                                 <  5:178451/149‑1     CGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGG                                                                                                                                                 <  8:40539/149‑1                                                                                                                     GCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGTCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCC                                 >  3:168803/1‑149                                                                                                                       CGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAG                                         >  7:76046/1‑139                                                                                                                       CGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAG                                         <  8:76046/139‑1                                                                                                                                              CCCAGGTGGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGTCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGCAAT        <  4:168803/149‑1                                                                                                                                                     GGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGCAATACCTGT  <  6:178451/148‑1                                                                                                                                                     GGCGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGCAATACCTGT  <  8:282527/148‑1                                                                                                                                                       CGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGC           <  3:257808/137‑1                                                                                                                                                       CGGCGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGC           >  4:257808/1‑137                                                                                                                                                                                                                                                                                                          CCTCCGGGCTGATCTATGCCGCCGAGGCAGGCACCCTGCGCGCCAGCGAAGCCGCGCAGCAAGCCTACCTGGCGCGTTTCGGCAATGACGAAAACGCCGAGCGCAAGGCCAACATCGCCGCCGAACTGGAATCGGCCCAGGCCCAGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3147003‑3146850 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcGATGTTGGCCTTGCGCTCGGCGTTTTCGTCATTGCCGAAACGCGCCAGGTAGGCTTGCTGCGCGGCTTCGCTGGCGCGCAGGGTGCCTGCCTCGGCGGCATAGATCAGCCCGGAGGCCTTGCCGATAACCTGCAATACCTGT  >  NC_002947/3146888‑3147029

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.