New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3912599 | 63 (1.170) | 4 (0.080) | 4/250 | NT | 6.3% | coding (945/1092 nt) | PP_3452 | GGDEF domain‑containing protein |
? | NC_002947 | = 3912626 | 59 (1.160) | coding (972/1092 nt) | PP_3452 | GGDEF domain‑containing protein |
ATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3912450‑3912599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggtcGACCTTGGCCAGGCCAATGCTGATGGTGACCGGGTGCTC < NC_002947/3912626‑3912588 ATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGT > 1:37309/1‑149 TCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTC < 4:142826/149‑1 TCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGT > 7:279117/1‑148 AAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCG < 5:298990/144‑1 AAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCG > 6:298990/1‑144 CATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTAGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGATCCAGCGCGTGCGCGACGACGCTGGCGCGCCCCCCGTCGACCAGGGCC > 8:283188/1‑149 CCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCG < 3:5653/131‑1 CCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCG > 4:5653/1‑131 GGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCGACCTTGGCCAGGCCAATGCTGATGGTGACCGG < 7:203537/149‑1 GGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCGACCTTGGCCAGGCCAATGCTGATGGTGACCGGGTGC < 8:3799/148‑1 GAGGTGAAGAGTGCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTCGACCTTGGCCAGGCCAATGCTGATGGTGACCGGGTGCTC < 7:283188/149‑1 ATCAAGACAAGCATGGCCGATCAGGCGTTTGCCCGGCTGGGAGGTGAAGAGTTCGCGATCTTCTTCGAAGGGCTGGATCAGCAAGGGGCCGAGCAGCGAGTGGCCGCGCTGTGCCAGCGCGTGCGCGAGGACGCTGGCGAGCACCCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3912450‑3912599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccggtcGACCTTGGCCAGGCCAATGCTGATGGTGACCGGGTGCTC < NC_002947/3912626‑3912588 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |