| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3976609 = | 60 (1.110) | 5 (0.100) | 4/250 | NT | 8.6% | coding (259/1014 nt) | PP_3506 | magnesium chelatase subunit ChII |
| ? | NC_002947 | 3976684 = | 49 (0.960) | coding (184/1014 nt) | PP_3506 | magnesium chelatase subunit ChII | |||||
ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3976762‑3976609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGGCACAGCGCCAGCTTGAGGTCGTCTGCA > NC_002947/3976684‑3976826 ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGG < 1:325169/148‑1ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGACCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGG < 1:328804/148‑1 GAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGC > 5:244979/1‑147 CATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGG > 6:259496/1‑131 GTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGCGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGG > 6:134418/1‑149 TCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGC > 4:87788/1‑149 CCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCa > 5:309878/1‑147 CCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGACGGCCAGGCCACGGGCCAGGGTGCTCTTGTCCATGCCACGCCGCCCT > 4:208785/1‑149 CTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTC < 3:87788/149‑1 GGCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGGCACAGCGCCAGCTTGAGGTCGTCTG > 8:187443/1‑148 GCAAGGTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGGCACAGCGCCAGCTTGAGGTCGTCTGCA > 6:169149/1‑149 ATCGAAGGGCCGCGTGGCATGGCCAAGAGCACCCTGGCCCGTGGCCTGGCCGACCTGCTTGGCGAAGGCCCGTTCGTCACCTTGCCATTGGGCGCCAGTGAAGAGCGGCTGGTCGGCACCCTCGACCTGGATGCCGCGCTGGGGCAGGGCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3976762‑3976609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcaaggTGACGAACGGGCCTTCGCCAAGCAGGTCGGCCAGGCCACGGGCCAGGGTGCTCTTGGCCATGCCACGCGGCCCTTCGATCAACACACCACCGATCCTGGGGTCGATAGCGGTCAGGCACAGCGCCAGCTTGAGGTCGTCTGCA > NC_002947/3976684‑3976826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |