| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4365970 = | 57 (1.060) | 7 (0.140) | 5/248 | NT | 12.3% | coding (759/1098 nt) | PP_3842 | hypothetical protein |
| ? | NC_002947 | 4366008 = | 46 (0.910) | coding (797/1098 nt) | PP_3842 | hypothetical protein | |||||
GCCAAGCGGGTCGCCAGTCCCGGAATCGTCAATATCGACCTGAGCAACCCTATGGGTATATGGCGGTGGGGTGCCTTGACCTTTAGCGTGTCTGCGATCTGCCCAAGCATTCCCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4366122‑4365970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacttgcAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTATT > NC_002947/4366008‑4366150 GCCAAGCGGGTCGCCAGTCCCGGAATCGTCAATATCGACCTGAGCAACCCTATGGGTATATGGCGGTGGGGTGCCTTGACCTTTAGCGTGTCTGCGATCTGCCCAAGCATTCCCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAAC > 6:21564/1‑149GCCAAGCGGGTCGCCAGTCCCGGAATCGTCAATATCGACCTGAGCAACCCTATGGGTATATGGCGGTGGGGTGCCTTGACCTTTAGCGTGTCTGCGATCTGCCCAAGCATTCCCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAA < 4:322880/148‑1 AGCGGGTCGCCAGTCCCGGAATCGTCAATATCGACCTGAGCAACCCTATGGGTATATGGCGGTGGGGTGCCTTGACCTTTAGCGTGTCTGCGATCTGCCCAAGCATTCCCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGC < 5:21564/149‑1 CCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCCGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCC > 7:195744/1‑149 CTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCG > 1:17694/1‑149 TGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGAGGATTCCGGGACTGGCGACCCGC > 2:148443/1‑149 TGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGC > 3:135737/1‑149 TGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAG > 5:325162/1‑105 TGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAG < 6:325162/105‑1 GTTCGGTGTTCGCTCATATAGCGCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGC > 6:123013/1‑149 GCCAGAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAAC < 4:135737/149‑1 GAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGTGATCAGCGCCGAGTCATTGAACTTTA < 5:65894/149‑1 GAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTA > 4:267757/1‑149 GAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTA < 4:307591/149‑1 GAACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTA < 4:329308/149‑1 ACTTGCAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTATT < 8:120734/149‑1 GCCAAGCGGGTCGCCAGTCCCGGAATCGTCAATATCGACCTGAGCAACCCTATGGGTATATGGCGGTGGGGTGCCTTGACCTTTAGCGTGTCTGCGATCTGCCCAAGCATTCCCTGCAAGTTCGGTGTTCGCTCATATAGCGCCAGAACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4366122‑4365970‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaacttgcAGGGAATGCTTGGGCAGATCGCAGACACGCTAAAGGTCAAGGCACCCCACCGCCATATACCCATAGGGTTGCTCAGGTCGATATTGACGATTCCGGGACTGGCGACCCGCTTGGCGATCAGCGCCGAGTCATTGAACTTTATT > NC_002947/4366008‑4366150 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |