New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4408994	44 (0.820)	3 (0.060)	3/242	NT	6.4%	coding (1320/1398 nt)	PP_3893	DNA helicase
	?	NC_002947	= 4409046	48 (0.970)					coding (1268/1398 nt)	PP_3893	DNA helicase

GTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4408843‑4408994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgctgcAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAGAA  <  NC_002947/4409046‑4408899                                                                                                                                                                                                                                                                                                              GTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGC                                                                                                                                                         >  6:224854/1‑149   GGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTG                                                                                                                                                       >  4:231136/1‑149              GCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCAGCAGCAGGCAGCAGCtcaaccg                                                                                                                                            <  2:329133/149‑8                                                         TTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAG                                                                                                 >  5:121492/1‑149                                                              GCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCA                                                                                            <  6:121492/149‑1                                                                GGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGG                                                                                          <  4:53033/149‑1                                                                                                                                                 CCTGCTGCAGCATCAGGGCGAGTTCGCCCGGTTTGCAAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCCGCAGCTCAACAGGCTCGCAGGTACTCCCGCTCGATGCTGAACAAATTCCAGCCAGGGGAGAGGTTCGGATGCTTCTGCC         >  2:143775/1‑149                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGTCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAGAA  <  1:218803/149‑1                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAGAA  <  8:284997/149‑1                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAG    >  3:231136/1‑147                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAG    >  7:284997/1‑147                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGAT                  >  1:181829/1‑133                                                                                                                                                        CAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGAT                  <  2:181829/133‑1                                                                                                                                                                                                                                                                                                              GTGGACAGGTCCAGCAGGTCGCTGCGGCAGTACAGCGCGTAGCGGTATTCGGTGACTTCTGGCGGCAGCAGCATCAGAACCTCTCCCCTGGCTGGAAGTTGTTCAGCATCGAGCGGGAGGACCTGCGAGCCGGTTGAGCTGCTGCCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4408843‑4408994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgctgcAGCATCAGGGCGAGTTCGCCCGGTTTGCCAACTACGCCGGAGCTCGCGAGCAGCAGCAGGCAGCAGCTCAACCGGCTCGCAGGTCCTCCCGCTCGATGCTGAACAACTTCCAGCCAGGGGAGAGGTTCTGATGCTGCTGCCGCCAGAA  <  NC_002947/4409046‑4408899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.