New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4588826 = | 75 (1.390) | 4 (0.080) | 4/256 | NT | 5.3% | coding (691/1164 nt) | ivd | isovaleryl‑CoA dehydrogenase |
? | NC_002947 | 4588866 = | 70 (1.340) | coding (731/1164 nt) | ivd | isovaleryl‑CoA dehydrogenase |
GATGCTCTGGCCGAATTGCTTGCGGTCGTGGATATACGGCACCACCAGGTCCATGCAGCTTTGCATGATGCCGGTCGGGCCGCCGGACAGCACCACACGTTCGTAGTCCAGGCCGCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4588975‑4588826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCATCGGCGAGTTCCAGCTGATCCAGGGCAAGATTGCCGACA > NC_002947/4588866‑4589012 GATGCTCTGGCCGAATTGCTTGCGGTCGTGGATATACGGCACCACCAGGTCCATGCAGCTTTGCATGATGCCGGTCGGGCCGCCGGACAGCACCACACGTTCGTAGTCCAGGCCGCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGC < 7:239218/149‑1 TCCAGGCCGCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGCCTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCA > 3:51391/1‑147 GGCCGCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGCCTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCAT > 5:305851/1‑149 GCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGCCTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCATCGGC > 7:19415/1‑149 GTTGAGCTGGCCTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCATCGGCGAGTTCCAGCTGATCCAGGGCAAG < 8:19415/149‑1 CCTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCATCGGCGAGTTCCAGCTGATCCAGGGCAAGATTGCCGACA > 6:150103/1‑149 GATGCTCTGGCCGAATTGCTTGCGGTCGTGGATATACGGCACCACCAGGTCCATGCAGCTTTGCATGATGCCGGTCGGGCCGCCGGACAGCACCACACGTTCGTAGTCCAGGCCGCTCATAAGGACGCGCACGCCGCCGTTGAGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4588975‑4588826 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTGGACTACGAACGTGTGGTGCTGTCCGGCGGCCCGACCGGCATCATGCAAAGCTGCATGGACCTGGTGGTGCCGTATATCCACGACCGCAAGCAATTCGGCCAGAGCATCGGCGAGTTCCAGCTGATCCAGGGCAAGATTGCCGACA > NC_002947/4588866‑4589012 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |