New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4765593 | 54 (1.000) | 3 (0.060) | 3/252 | NT | 6.1% | coding (246/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
? | NC_002947 | = 4765635 | 41 (0.800) | coding (288/2439 nt) | fpvA | TonB‑dependent outer membrane ferripyoverdine receptor FpvA |
CGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765445‑4765593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < NC_002947/4765635‑4765488 CGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGCCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT < 5:292430/149‑1 GTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCT > 7:250046/1‑149 GCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGT < 8:250046/148‑1 CCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGTACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGC < 3:324380/149‑1 TACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < 8:190076/149‑1 CGGCGATCGCCCAGGCCCAACAGGTCCAGTTCAACGTGCCGGCCCAGCCGCTGGCCAGCGCCTTGTTGGCCTTCGGCTCGCAATCGAACCTGCAGGTGCTCTATAGCCCACAGGACGTGGAAGGCAAGCGCAGCAGCGCACTGACCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4765445‑4765593 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtACCCTGCAGCAGCCGCGACAGGGCCGCGGCGGGCTCCATTGCACCGGTCAGTGCGCTGCTGCGCTTGCCTTCCACGTCCTGTGGGCTATAGAGCACCTGCAGGTTCGATTGCGAGCCGAAGGCCAACAAGGCGCTGGCCAGCGGCTGG < NC_002947/4765635‑4765488 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |