| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5027551 | 56 (1.040) | 4 (0.080) | 4/248 | NT | 6.5% | coding (861/993 nt) | ocd | ornithine cyclodeaminase |
| ? | NC_002947 | = 5027585 | 63 (1.250) | coding (895/993 nt) | ocd | ornithine cyclodeaminase | |||||
GCCAGACGGCAACACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5027448‑5027551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagatcgcAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCAAGGATCACCTGACCCAGTTCGGCGTACACACGA‑‑AGGTCTTGTGCAACACCAGCGTTGATCGCGTGATGGAGTTCTCCAAGTGTTGCCGTCTGGCTGACTCGA < NC_002947/5027585‑5027440 GCCAGACGGCAACACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTC < 7:267557/146‑1GCCAGACGGCAACACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTC > 8:267557/1‑146 ACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCA < 7:254542/135‑1 ACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCA > 8:254542/1‑135 AGATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCAAGGATCACCTGACCCAGTTCGGCGTACACACGA‑‑AGGTCTTGTGCAACACCAGCGTTGATCGCGTGATGGAGTTCTCCAAGTGTTGCCGTCTGGCTGAC < 1:73747/149‑1 GATCGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCAAGGATCACCTGACCCAGTTCGGCGTACACACGACCAGGTCTTGTGCAACACCAGCGTTGATCGCGTGATGGAGTTCTCCAAGTGTTGCCGTCTGGCTGA < 1:102467/149‑1 CGCAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCAAGGATCACCTGACCCAGTTCGGCGTACACACGA‑‑AGGTCTTGTGCAACACCAGCGTTGATCGCGTGATGGAGTTCTCCAAGTGTTGCCGTCTGGCTGACTCGA > 5:48417/1‑149 GCCAGACGGCAACACTTGGAGAACTCCATCACGCGATCAACGCTGGTGTTGCACAAGACCTTCGTGTGTACGCCGAACTGGGTCAGGTGATCCTTGGAGATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5027448‑5027551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagatcgcAAAGAGTTACGTCGGTTGGAGTCAACCTTCCGACGCGATCTCCAAGGATCACCTGACCCAGTTCGGCGTACACACGA‑‑AGGTCTTGTGCAACACCAGCGTTGATCGCGTGATGGAGTTCTCCAAGTGTTGCCGTCTGGCTGACTCGA < NC_002947/5027585‑5027440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |