| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5036927 = | NA (NA) | 4 (0.080) | 3/250 | NT | NA | coding (19/1536 nt) | PP_4443 | transposase |
| ? | NC_002947 | 5036999 = | NA (NA) | coding (91/1536 nt) | PP_4443 | transposase | |||||
AACTTGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5037081‑5036927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgagGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATA > NC_002947/5036999‑5037143 AACTTGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTG > 1:155213/1‑149AACTTGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTG > 3:218810/1‑149 ACTTGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGG > 2:297847/1‑149 TGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTC < 2:155213/148‑1 TGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGA < 5:76537/148‑1 GCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGC > 2:163166/1‑149 CCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGC > 1:313869/1‑148 CCTCGACCTAGGATTGCAATTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGGGTCATCTGGTCGAGGCGATGAGCAGGAAGATTCAGAACGATGAAATCCTCATCGAACAGTTCAAGTTCGAAATCGCCCTGCTCAAACGg > 4:2296/1‑147 GACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAA < 1:163166/149‑1 GTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGA < 3:145681/149‑1 GTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGA > 5:221406/1‑149 GTCGAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGA < 8:25869/149‑1 GAGGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATA < 2:139065/148‑1 GGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACC > 1:281433/1‑137 GGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACC < 2:281433/137‑1 AACTTGTGGCGTTTGAGCAGGGCGATTTCGAACTTGAATTGTTCGATGAGGATTTCGTCGTTCTGGATCTTCCGGCTCATCGCCTCGACCTGGGACTGCAACTGCAACGCCTGTGCCGCCAAGGCACGAAGCTGTTCCGGAGTCATCTGGTCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5037081‑5036927‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcgagGCGATGAGCCGGAAGATCCAGAACGACGAAATCCTCATCGAACAATTCAAGTTCGAAATCGCCCTGCTCAAACGCCACAAGTTTGCCAAGCGCAGCGAGCAAATCAGCCCGGCGCAAGGCAGCTTGCTGGATGACCTGCTCGATA > NC_002947/5036999‑5037143 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |