| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5142328 = | 75 (1.390) | 4 (0.080) | 4/248 | NT | 6.2% | coding (663/1173 nt) | PP_4526 | MFS transporter |
| ? | NC_002947 | 5142403 = | 51 (1.010) | coding (738/1173 nt) | PP_4526 | MFS transporter | |||||
GTGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5142483‑5142328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggcGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGGGGGTATCGGGCTGGCGCTGGGT > NC_002947/5142403‑5142550 GTGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGT < 2:96532/149‑1GTGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGT < 5:289672/149‑1 TGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTG < 7:39147/149‑1 TGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTG > 8:149015/1‑149 GGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGG > 8:250653/1‑149 GGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCG > 2:323283/1‑149 CAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATG > 1:288249/1‑133 CAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATG < 2:288249/133‑1 GCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGA > 3:30873/1‑149 AAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTG < 4:30873/149‑1 GCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGGGGGTATCGGGCTGGCGC > 2:19924/1‑149 GCCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGGGGGTATCGGGCTGGCGC > 4:172522/1‑149 CCGGCGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGGGGGTATCGGGCTGGCGCT > 1:135157/1‑149 CCGGCGTTTGGCCTGGCGGCGGCGGTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGTGGGTATCGGGCTGGCGCT < 2:202999/149‑1 CGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGATCGTGCGCCGTGATGGCCGCACTGCAACCTGGTTGACCGCCACCCTGTGGTTGCTAGGGCTGGGTGTGCTGGCCTGCCTTATCGGTGGGGGTATCGGGCTGGCGCTGGGT < 2:110983/149‑1 GTGGCGGTCAACCAGGTTGAAGTGCGGCCATCACGGCGCACGCTCACCAGCAAGACGCCCAACGCCGCCGCCAGGCCAAACGCCGGCCAGAACAGGTCAGCCAGCCACTGCCCGCGAAACTGCTGATTGGCCATCTGTGACAGAAAGGTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5142483‑5142328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggcGTTTGGCCTGGCGGCGGCGTTGGGCGTCTTGCTGGTGAGCGTGCGCCGTGATGGCCGCACTTCAACCTGGTTGACCGCCACCCTGTGGTTGCAAGGGCTGGGTGTGCTGGCCTGCCTGATGGGTGGGGGTATCGGGCTGGCGCTGGGT > NC_002947/5142403‑5142550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |