| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5240861 | 57 (1.060) | 4 (0.080) | 4/256 | NT | 6.3% | coding (423/807 nt) | PP_4618 | hypothetical protein |
| ? | NC_002947 | = 5240965 | 64 (1.230) | coding (527/807 nt) | PP_4618 | hypothetical protein | |||||
TACTGCAGCGCCGCCGCGGCCAACCACTGACCCTGGCCATCCTCGCTTTGGAACTGGCCAGGCGGCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5240713‑5240861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCAGCAATTCGCGGCAGTCGCTGGGATACAGGCGCCGGCCGCCGCAGGGATCGAGCAGGTGGTCGGCACCCGGTACGCGCAGCA < NC_002947/5240965‑5240821 TACTGCAGCGCCGCCGCGGCCAACCACTGACCCTGGCCATCCTCGCTTTGGAACTGGCCAGGCGGCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGC < 7:298909/149‑1TACTGCAGCGCCGCCGCGGCCAACCACTGACCCTGGCCATCCTCGCTTTGGAACTGGCCAGGCGGCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTAACGGGTGCCGACCACATGCTGGATCCCTGC > 7:299670/1‑149 CACTGACCCTGGCCATCCTCGCTTTGGAACTGGCCAGGCGGCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGCAGCGGGCTGGCGCTGCGCAGGTGC > 8:301144/1‑149 GCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCA > 4:42240/1‑149 CTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCAGCAATTCGCGGCAGTCGCTGGGATACAGGCGCCGGCCGCCGCAGG < 7:301144/148‑1 CTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCAGCAATTCGCGGCAGTCGCTGGGATACAGGCGCCGGCCGCCGCAG < 3:42240/147‑1 CAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCAGCAATTCGCGGCAGTCGCTGGGATACAGGCGCCGGCCGCCGCAGGGATCGAGCAGGTGGTCGGCACCCGGTACGCGCAGCA < 1:291234/146‑1 TACTGCAGCGCCGCCGCGGCCAACCACTGACCCTGGCCATCCTCGCTTTGGAACTGGCCAGGCGGCTGTCCATACCGCTGGAGGGTGTGGGCTTCCCTGGCCATTTCCTGCTGCGCGTACCGGGTGCCGACCACCTGCTCGATCCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5240713‑5240861‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGGTGCGGGCCGAACTGGCGCGCCAGCAATTCGCGGCAGTCGCTGGGATACAGGCGCCGGCCGCCGCAGGGATCGAGCAGGTGGTCGGCACCCGGTACGCGCAGCA < NC_002947/5240965‑5240821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |