New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5273549	73 (1.360)	4 (0.080)	4/254	NT	5.4%	coding (696/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G
	?	NC_002947	= 5273577	71 (1.370)					coding (724/1125 nt)	rlmG	ribosomal RNA large subunit methyltransferase G

GAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5273397‑5273549 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGCCGGCGCGTCGAGGCGGTA  <  NC_002947/5273577‑5273433                                                                                                                                                                                                                                                                                                            GAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGG                                                                                                                                                       >  6:18593/1‑149     GGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGT                                                                                                                                                   <  2:221933/149‑1     GGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGT                                                                                                                                                   <  2:23915/149‑1     GGCCGCTCGACAAGTCCCGCTACACCAGCTTCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAAAGTGTTCTGCAGTGAAGGCCTGGATATCGGGACGCGGGCGTTCATCCCTCATCTACCACGCAACCTCGGCCGT                                                                                                                                                   <  8:314491/149‑1                             CCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGCCCGTTGCCGCAGCCCAGGTCTGCCACCC                                                                                                                           >  6:54229/1‑149                                             CGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTT                                                                                                           <  5:54229/149‑1                                                           TTGACTTGGTCAACGACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGC                                                                                                                  >  7:285410/1‑128                                                           TTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGC                                                                                                                  <  8:285410/128‑1                                                                                                                                                     GCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGCCGGCGCGTCGAGGCGG    >  3:181221/1‑148                                                                                                                                                     GCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGC                    >  1:62438/1‑132                                                                                                                                                     GCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGC                    <  2:62438/132‑1                                                                                                                                                     GCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGT                      <  1:171210/130‑1                                                                                                                                                     GCCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGT                      >  2:171210/1‑130                                                                                                                                                      CCGTTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGCCGGCGCGTCGAGGCGGTA  <  1:224644/149‑1                                                                                                                                                                                                                                                                                                            GAGCGGCCGCTCGCCAAGTCCCCCTACCCCAGCTGCTACCGCCTCGACGCGCCGGCACTTGACTTGGTCAACCACGCCAACGTGTTCTGCCGTGAAGGCCTGGATATCGGGACGCGGGCGTTCCTCCCGCATCTACCACGCAACCTCGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5273397‑5273549 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtTGCCGCAGCCCAGGTCTGCCACCCGCGCACGGCCGAGGTTGCGTGGTAGATGCGGGAGGAACGCCCGCGTCCCGATATCCAGGCCTTCACGGCAGAACACGTTGGCGTGGTTGACCAAGTCAAGTGCCGGCGCGTCGAGGCGGTA  <  NC_002947/5273577‑5273433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.